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Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07
Enterobacter sp. FY-07 can produce bacterial cellulose (BC) under aerobic and anaerobic conditions. Three potential BC synthesis gene clusters (bcsI, bcsII and bcsIII) of Enterobacter sp. FY-07 have been predicted using genome sequencing and comparative genome analysis, in which bcsIII was confirmed...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4766428/ https://www.ncbi.nlm.nih.gov/pubmed/26911736 http://dx.doi.org/10.1038/srep21863 |
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author | Ji, Kaihua Wang, Wei Zeng, Bing Chen, Sibin Zhao, Qianqian Chen, Yueqing Li, Guoqiang Ma, Ting |
author_facet | Ji, Kaihua Wang, Wei Zeng, Bing Chen, Sibin Zhao, Qianqian Chen, Yueqing Li, Guoqiang Ma, Ting |
author_sort | Ji, Kaihua |
collection | PubMed |
description | Enterobacter sp. FY-07 can produce bacterial cellulose (BC) under aerobic and anaerobic conditions. Three potential BC synthesis gene clusters (bcsI, bcsII and bcsIII) of Enterobacter sp. FY-07 have been predicted using genome sequencing and comparative genome analysis, in which bcsIII was confirmed as the main contributor to BC synthesis by gene knockout and functional reconstitution methods. Protein homology, gene arrangement and gene constitution analysis indicated that bcsIII had high identity to the bcsI operon of Enterobacter sp. 638; however, its arrangement and composition were same as those of BC synthesizing operon of G. xylinum ATCC53582 except for the flanking sequences. According to the BC biosynthesizing process, oxygen is not directly involved in the reactions of BC synthesis, however, energy is required to activate intermediate metabolites and synthesize the activator, c-di-GMP. Comparative transcriptome and metabolite quantitative analysis demonstrated that under anaerobic conditions genes involved in the TCA cycle were downregulated, however, genes in the nitrate reduction and gluconeogenesis pathways were upregulated, especially, genes in three pyruvate metabolism pathways. These results suggested that Enterobacter sp. FY-07 could produce energy efficiently under anaerobic conditions to meet the requirement of BC biosynthesis. |
format | Online Article Text |
id | pubmed-4766428 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47664282016-03-02 Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07 Ji, Kaihua Wang, Wei Zeng, Bing Chen, Sibin Zhao, Qianqian Chen, Yueqing Li, Guoqiang Ma, Ting Sci Rep Article Enterobacter sp. FY-07 can produce bacterial cellulose (BC) under aerobic and anaerobic conditions. Three potential BC synthesis gene clusters (bcsI, bcsII and bcsIII) of Enterobacter sp. FY-07 have been predicted using genome sequencing and comparative genome analysis, in which bcsIII was confirmed as the main contributor to BC synthesis by gene knockout and functional reconstitution methods. Protein homology, gene arrangement and gene constitution analysis indicated that bcsIII had high identity to the bcsI operon of Enterobacter sp. 638; however, its arrangement and composition were same as those of BC synthesizing operon of G. xylinum ATCC53582 except for the flanking sequences. According to the BC biosynthesizing process, oxygen is not directly involved in the reactions of BC synthesis, however, energy is required to activate intermediate metabolites and synthesize the activator, c-di-GMP. Comparative transcriptome and metabolite quantitative analysis demonstrated that under anaerobic conditions genes involved in the TCA cycle were downregulated, however, genes in the nitrate reduction and gluconeogenesis pathways were upregulated, especially, genes in three pyruvate metabolism pathways. These results suggested that Enterobacter sp. FY-07 could produce energy efficiently under anaerobic conditions to meet the requirement of BC biosynthesis. Nature Publishing Group 2016-02-25 /pmc/articles/PMC4766428/ /pubmed/26911736 http://dx.doi.org/10.1038/srep21863 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Ji, Kaihua Wang, Wei Zeng, Bing Chen, Sibin Zhao, Qianqian Chen, Yueqing Li, Guoqiang Ma, Ting Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07 |
title | Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07 |
title_full | Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07 |
title_fullStr | Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07 |
title_full_unstemmed | Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07 |
title_short | Bacterial cellulose synthesis mechanism of facultative anaerobe Enterobacter sp. FY-07 |
title_sort | bacterial cellulose synthesis mechanism of facultative anaerobe enterobacter sp. fy-07 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4766428/ https://www.ncbi.nlm.nih.gov/pubmed/26911736 http://dx.doi.org/10.1038/srep21863 |
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