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DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses
Odors elicit complex patterns of activated olfactory sensory neurons. Knowing the complete olfactome, i.e. the responses in all sensory neurons for all relevant odorants, is desirable to understand olfactory coding. The DoOR project combines all available Drosophila odorant response data into a sing...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4766438/ https://www.ncbi.nlm.nih.gov/pubmed/26912260 http://dx.doi.org/10.1038/srep21841 |
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author | Münch, Daniel Galizia, C. Giovanni |
author_facet | Münch, Daniel Galizia, C. Giovanni |
author_sort | Münch, Daniel |
collection | PubMed |
description | Odors elicit complex patterns of activated olfactory sensory neurons. Knowing the complete olfactome, i.e. the responses in all sensory neurons for all relevant odorants, is desirable to understand olfactory coding. The DoOR project combines all available Drosophila odorant response data into a single consensus response matrix. Since its first release many studies were published: receptors were deorphanized and several response profiles were expanded. In this study, we add unpublished data to the odor-response profiles for four odorant receptors (Or10a, Or42b, Or47b, Or56a). We deorphanize Or69a, showing a broad response spectrum with the best ligands including 3-hydroxyhexanoate, alpha-terpineol, 3-octanol and linalool. We include all of these datasets into DoOR, provide a comprehensive update of both code and data, and new tools for data analyses and visualizations. The DoOR project has a web interface for quick queries (http://neuro.uni.kn/DoOR), and a downloadable, open source toolbox written in R, including all processed and original datasets. DoOR now gives reliable odorant-responses for nearly all Drosophila olfactory responding units, listing 693 odorants, for a total of 7381 data points. |
format | Online Article Text |
id | pubmed-4766438 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47664382016-03-02 DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses Münch, Daniel Galizia, C. Giovanni Sci Rep Article Odors elicit complex patterns of activated olfactory sensory neurons. Knowing the complete olfactome, i.e. the responses in all sensory neurons for all relevant odorants, is desirable to understand olfactory coding. The DoOR project combines all available Drosophila odorant response data into a single consensus response matrix. Since its first release many studies were published: receptors were deorphanized and several response profiles were expanded. In this study, we add unpublished data to the odor-response profiles for four odorant receptors (Or10a, Or42b, Or47b, Or56a). We deorphanize Or69a, showing a broad response spectrum with the best ligands including 3-hydroxyhexanoate, alpha-terpineol, 3-octanol and linalool. We include all of these datasets into DoOR, provide a comprehensive update of both code and data, and new tools for data analyses and visualizations. The DoOR project has a web interface for quick queries (http://neuro.uni.kn/DoOR), and a downloadable, open source toolbox written in R, including all processed and original datasets. DoOR now gives reliable odorant-responses for nearly all Drosophila olfactory responding units, listing 693 odorants, for a total of 7381 data points. Nature Publishing Group 2016-02-25 /pmc/articles/PMC4766438/ /pubmed/26912260 http://dx.doi.org/10.1038/srep21841 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Münch, Daniel Galizia, C. Giovanni DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses |
title | DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses |
title_full | DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses |
title_fullStr | DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses |
title_full_unstemmed | DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses |
title_short | DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses |
title_sort | door 2.0 - comprehensive mapping of drosophila melanogaster odorant responses |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4766438/ https://www.ncbi.nlm.nih.gov/pubmed/26912260 http://dx.doi.org/10.1038/srep21841 |
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