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DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses

Odors elicit complex patterns of activated olfactory sensory neurons. Knowing the complete olfactome, i.e. the responses in all sensory neurons for all relevant odorants, is desirable to understand olfactory coding. The DoOR project combines all available Drosophila odorant response data into a sing...

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Autores principales: Münch, Daniel, Galizia, C. Giovanni
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4766438/
https://www.ncbi.nlm.nih.gov/pubmed/26912260
http://dx.doi.org/10.1038/srep21841
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author Münch, Daniel
Galizia, C. Giovanni
author_facet Münch, Daniel
Galizia, C. Giovanni
author_sort Münch, Daniel
collection PubMed
description Odors elicit complex patterns of activated olfactory sensory neurons. Knowing the complete olfactome, i.e. the responses in all sensory neurons for all relevant odorants, is desirable to understand olfactory coding. The DoOR project combines all available Drosophila odorant response data into a single consensus response matrix. Since its first release many studies were published: receptors were deorphanized and several response profiles were expanded. In this study, we add unpublished data to the odor-response profiles for four odorant receptors (Or10a, Or42b, Or47b, Or56a). We deorphanize Or69a, showing a broad response spectrum with the best ligands including 3-hydroxyhexanoate, alpha-terpineol, 3-octanol and linalool. We include all of these datasets into DoOR, provide a comprehensive update of both code and data, and new tools for data analyses and visualizations. The DoOR project has a web interface for quick queries (http://neuro.uni.kn/DoOR), and a downloadable, open source toolbox written in R, including all processed and original datasets. DoOR now gives reliable odorant-responses for nearly all Drosophila olfactory responding units, listing 693 odorants, for a total of 7381 data points.
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spelling pubmed-47664382016-03-02 DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses Münch, Daniel Galizia, C. Giovanni Sci Rep Article Odors elicit complex patterns of activated olfactory sensory neurons. Knowing the complete olfactome, i.e. the responses in all sensory neurons for all relevant odorants, is desirable to understand olfactory coding. The DoOR project combines all available Drosophila odorant response data into a single consensus response matrix. Since its first release many studies were published: receptors were deorphanized and several response profiles were expanded. In this study, we add unpublished data to the odor-response profiles for four odorant receptors (Or10a, Or42b, Or47b, Or56a). We deorphanize Or69a, showing a broad response spectrum with the best ligands including 3-hydroxyhexanoate, alpha-terpineol, 3-octanol and linalool. We include all of these datasets into DoOR, provide a comprehensive update of both code and data, and new tools for data analyses and visualizations. The DoOR project has a web interface for quick queries (http://neuro.uni.kn/DoOR), and a downloadable, open source toolbox written in R, including all processed and original datasets. DoOR now gives reliable odorant-responses for nearly all Drosophila olfactory responding units, listing 693 odorants, for a total of 7381 data points. Nature Publishing Group 2016-02-25 /pmc/articles/PMC4766438/ /pubmed/26912260 http://dx.doi.org/10.1038/srep21841 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Münch, Daniel
Galizia, C. Giovanni
DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses
title DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses
title_full DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses
title_fullStr DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses
title_full_unstemmed DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses
title_short DoOR 2.0 - Comprehensive Mapping of Drosophila melanogaster Odorant Responses
title_sort door 2.0 - comprehensive mapping of drosophila melanogaster odorant responses
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4766438/
https://www.ncbi.nlm.nih.gov/pubmed/26912260
http://dx.doi.org/10.1038/srep21841
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