Cargando…
Targeted exploration and analysis of large cross-platform human transcriptomic compendia
We present SEEK (http://seek.princeton.edu), a query-based search engine across very large transcriptomic data collections, including thousands of human data sets from almost 50 microarray and next-generation sequencing platforms. SEEK uses a novel query-level cross-validation-based algorithm to aut...
Autores principales: | Zhu, Qian, Wong, Aaron K, Krishnan, Arjun, Aure, Miriam R, Tadych, Alicja, Zhang, Ran, Corney, David C, Greene, Casey S, Bongo, Lars A, Kristensen, Vessela N, Charikar, Moses, Li, Kai, Troyanskaya, Olga G. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4768301/ https://www.ncbi.nlm.nih.gov/pubmed/25581801 http://dx.doi.org/10.1038/nmeth.3249 |
Ejemplares similares
-
IMP 2.0: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks
por: Wong, Aaron K., et al.
Publicado: (2015) -
PathCORE-T: identifying and visualizing globally co-occurring pathways in large transcriptomic compendia
por: Chen, Kathleen M., et al.
Publicado: (2018) -
Using genome-wide expression compendia to study microorganisms
por: Lee, Alexandra J., et al.
Publicado: (2022) -
COLOMBOS: Access Port for Cross-Platform Bacterial Expression Compendia
por: Engelen, Kristof, et al.
Publicado: (2011) -
Computationally Efficient Assembly of Pseudomonas aeruginosa Gene Expression Compendia
por: Doing, Georgia, et al.
Publicado: (2022)