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Assessment of the Characteristics of Orientation Distribution Functions in HARDI Using Morphological Metrics
Orientation distribution functions (ODFs) are widely used to resolve fiber crossing problems in high angular resolution diffusion imaging (HARDI). The characteristics of the ODFs are often assessed using a visual criterion, although the use of objective criteria is also reported, which are directly...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4769219/ https://www.ncbi.nlm.nih.gov/pubmed/26919477 http://dx.doi.org/10.1371/journal.pone.0150161 |
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author | Sun, Chang-yu Zhu, Yue-min Chu, Chun-yu Yang, Feng Liu, Wan-yu Korenberg, Julie R. Hsu, Edward W. |
author_facet | Sun, Chang-yu Zhu, Yue-min Chu, Chun-yu Yang, Feng Liu, Wan-yu Korenberg, Julie R. Hsu, Edward W. |
author_sort | Sun, Chang-yu |
collection | PubMed |
description | Orientation distribution functions (ODFs) are widely used to resolve fiber crossing problems in high angular resolution diffusion imaging (HARDI). The characteristics of the ODFs are often assessed using a visual criterion, although the use of objective criteria is also reported, which are directly borrowed from classic signal and image processing theory because they are intuitive and simple to compute. However, they are not always pertinent for the characterization of ODFs. We propose a more general paradigm for assessing the characteristics of ODFs. The idea consists in regarding an ODF as a three-dimensional (3D) point cloud, projecting the 3D point cloud onto an angle-distance map, constructing an angle-distance matrix, and calculating metrics such as length ratio, separability, and uncertainty. The results from both simulated and real data show that the proposed metrics allow for the assessment of the characteristics of ODFs in a quantitative and relatively complete manner. |
format | Online Article Text |
id | pubmed-4769219 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-47692192016-03-09 Assessment of the Characteristics of Orientation Distribution Functions in HARDI Using Morphological Metrics Sun, Chang-yu Zhu, Yue-min Chu, Chun-yu Yang, Feng Liu, Wan-yu Korenberg, Julie R. Hsu, Edward W. PLoS One Research Article Orientation distribution functions (ODFs) are widely used to resolve fiber crossing problems in high angular resolution diffusion imaging (HARDI). The characteristics of the ODFs are often assessed using a visual criterion, although the use of objective criteria is also reported, which are directly borrowed from classic signal and image processing theory because they are intuitive and simple to compute. However, they are not always pertinent for the characterization of ODFs. We propose a more general paradigm for assessing the characteristics of ODFs. The idea consists in regarding an ODF as a three-dimensional (3D) point cloud, projecting the 3D point cloud onto an angle-distance map, constructing an angle-distance matrix, and calculating metrics such as length ratio, separability, and uncertainty. The results from both simulated and real data show that the proposed metrics allow for the assessment of the characteristics of ODFs in a quantitative and relatively complete manner. Public Library of Science 2016-02-26 /pmc/articles/PMC4769219/ /pubmed/26919477 http://dx.doi.org/10.1371/journal.pone.0150161 Text en © 2016 Sun et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Sun, Chang-yu Zhu, Yue-min Chu, Chun-yu Yang, Feng Liu, Wan-yu Korenberg, Julie R. Hsu, Edward W. Assessment of the Characteristics of Orientation Distribution Functions in HARDI Using Morphological Metrics |
title | Assessment of the Characteristics of Orientation Distribution Functions in HARDI Using Morphological Metrics |
title_full | Assessment of the Characteristics of Orientation Distribution Functions in HARDI Using Morphological Metrics |
title_fullStr | Assessment of the Characteristics of Orientation Distribution Functions in HARDI Using Morphological Metrics |
title_full_unstemmed | Assessment of the Characteristics of Orientation Distribution Functions in HARDI Using Morphological Metrics |
title_short | Assessment of the Characteristics of Orientation Distribution Functions in HARDI Using Morphological Metrics |
title_sort | assessment of the characteristics of orientation distribution functions in hardi using morphological metrics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4769219/ https://www.ncbi.nlm.nih.gov/pubmed/26919477 http://dx.doi.org/10.1371/journal.pone.0150161 |
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