Cargando…
Structural hot spots for the solubility of globular proteins
Natural selection shapes protein solubility to physiological requirements and recombinant applications that require higher protein concentrations are often problematic. This raises the question whether the solubility of natural protein sequences can be improved. We here show an anti-correlation betw...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4770091/ https://www.ncbi.nlm.nih.gov/pubmed/26905391 http://dx.doi.org/10.1038/ncomms10816 |
_version_ | 1782418196628766720 |
---|---|
author | Ganesan, Ashok Siekierska, Aleksandra Beerten, Jacinte Brams, Marijke Van Durme, Joost De Baets, Greet Van der Kant, Rob Gallardo, Rodrigo Ramakers, Meine Langenberg, Tobias Wilkinson, Hannah De Smet, Frederik Ulens, Chris Rousseau, Frederic Schymkowitz, Joost |
author_facet | Ganesan, Ashok Siekierska, Aleksandra Beerten, Jacinte Brams, Marijke Van Durme, Joost De Baets, Greet Van der Kant, Rob Gallardo, Rodrigo Ramakers, Meine Langenberg, Tobias Wilkinson, Hannah De Smet, Frederik Ulens, Chris Rousseau, Frederic Schymkowitz, Joost |
author_sort | Ganesan, Ashok |
collection | PubMed |
description | Natural selection shapes protein solubility to physiological requirements and recombinant applications that require higher protein concentrations are often problematic. This raises the question whether the solubility of natural protein sequences can be improved. We here show an anti-correlation between the number of aggregation prone regions (APRs) in a protein sequence and its solubility, suggesting that mutational suppression of APRs provides a simple strategy to increase protein solubility. We show that mutations at specific positions within a protein structure can act as APR suppressors without affecting protein stability. These hot spots for protein solubility are both structure and sequence dependent but can be computationally predicted. We demonstrate this by reducing the aggregation of human α-galactosidase and protective antigen of Bacillus anthracis through mutation. Our results indicate that many proteins possess hot spots allowing to adapt protein solubility independently of structure and function. |
format | Online Article Text |
id | pubmed-4770091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47700912016-03-04 Structural hot spots for the solubility of globular proteins Ganesan, Ashok Siekierska, Aleksandra Beerten, Jacinte Brams, Marijke Van Durme, Joost De Baets, Greet Van der Kant, Rob Gallardo, Rodrigo Ramakers, Meine Langenberg, Tobias Wilkinson, Hannah De Smet, Frederik Ulens, Chris Rousseau, Frederic Schymkowitz, Joost Nat Commun Article Natural selection shapes protein solubility to physiological requirements and recombinant applications that require higher protein concentrations are often problematic. This raises the question whether the solubility of natural protein sequences can be improved. We here show an anti-correlation between the number of aggregation prone regions (APRs) in a protein sequence and its solubility, suggesting that mutational suppression of APRs provides a simple strategy to increase protein solubility. We show that mutations at specific positions within a protein structure can act as APR suppressors without affecting protein stability. These hot spots for protein solubility are both structure and sequence dependent but can be computationally predicted. We demonstrate this by reducing the aggregation of human α-galactosidase and protective antigen of Bacillus anthracis through mutation. Our results indicate that many proteins possess hot spots allowing to adapt protein solubility independently of structure and function. Nature Publishing Group 2016-02-24 /pmc/articles/PMC4770091/ /pubmed/26905391 http://dx.doi.org/10.1038/ncomms10816 Text en Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Ganesan, Ashok Siekierska, Aleksandra Beerten, Jacinte Brams, Marijke Van Durme, Joost De Baets, Greet Van der Kant, Rob Gallardo, Rodrigo Ramakers, Meine Langenberg, Tobias Wilkinson, Hannah De Smet, Frederik Ulens, Chris Rousseau, Frederic Schymkowitz, Joost Structural hot spots for the solubility of globular proteins |
title | Structural hot spots for the solubility of globular proteins |
title_full | Structural hot spots for the solubility of globular proteins |
title_fullStr | Structural hot spots for the solubility of globular proteins |
title_full_unstemmed | Structural hot spots for the solubility of globular proteins |
title_short | Structural hot spots for the solubility of globular proteins |
title_sort | structural hot spots for the solubility of globular proteins |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4770091/ https://www.ncbi.nlm.nih.gov/pubmed/26905391 http://dx.doi.org/10.1038/ncomms10816 |
work_keys_str_mv | AT ganesanashok structuralhotspotsforthesolubilityofglobularproteins AT siekierskaaleksandra structuralhotspotsforthesolubilityofglobularproteins AT beertenjacinte structuralhotspotsforthesolubilityofglobularproteins AT bramsmarijke structuralhotspotsforthesolubilityofglobularproteins AT vandurmejoost structuralhotspotsforthesolubilityofglobularproteins AT debaetsgreet structuralhotspotsforthesolubilityofglobularproteins AT vanderkantrob structuralhotspotsforthesolubilityofglobularproteins AT gallardorodrigo structuralhotspotsforthesolubilityofglobularproteins AT ramakersmeine structuralhotspotsforthesolubilityofglobularproteins AT langenbergtobias structuralhotspotsforthesolubilityofglobularproteins AT wilkinsonhannah structuralhotspotsforthesolubilityofglobularproteins AT desmetfrederik structuralhotspotsforthesolubilityofglobularproteins AT ulenschris structuralhotspotsforthesolubilityofglobularproteins AT rousseaufrederic structuralhotspotsforthesolubilityofglobularproteins AT schymkowitzjoost structuralhotspotsforthesolubilityofglobularproteins |