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Crystal structure of N-(3-oxo­butano­yl)-l-homoserine lactone

The structure and absolute configuration of the title compound, C(8)H(11)NO(4), which is a known quorum-sensing modulator, have been determined. The mol­ecule exhibits signs of an intra­molecular attractive carbon­yl–carbonyl n→π* inter­action between the amide and lactone ester groups, specifically...

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Autores principales: Newberry, R.W., Raines, R.T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4770979/
https://www.ncbi.nlm.nih.gov/pubmed/26958372
http://dx.doi.org/10.1107/S2056989015024913
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author Newberry, R.W.
Raines, R.T.
author_facet Newberry, R.W.
Raines, R.T.
author_sort Newberry, R.W.
collection PubMed
description The structure and absolute configuration of the title compound, C(8)H(11)NO(4), which is a known quorum-sensing modulator, have been determined. The mol­ecule exhibits signs of an intra­molecular attractive carbon­yl–carbonyl n→π* inter­action between the amide and lactone ester groups, specifically – a short contact of 2.709 (2) Å between the amide oxygen atom and ester carbon atom, approach of the amide oxygen atom to the ester carbonyl group along the Bürgi–Dunitz trajectory, at 99.1 (1)°, and pyramidalization of the ester carbonyl group by 1.1 (1)°. Moreover, a similar n→π* inter­action is observed for the amide carbonyl group approached by the ketone oxygen donor. These inter­actions apparently affect the conformation of the uncomplexed mol­ecule, which adopts a different shape when bound to protein receptors. In the crystal, the mol­ecules form translational chains along the a axis via N—H⋯O hydrogen bonds.
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spelling pubmed-47709792016-03-08 Crystal structure of N-(3-oxo­butano­yl)-l-homoserine lactone Newberry, R.W. Raines, R.T. Acta Crystallogr E Crystallogr Commun Research Communications The structure and absolute configuration of the title compound, C(8)H(11)NO(4), which is a known quorum-sensing modulator, have been determined. The mol­ecule exhibits signs of an intra­molecular attractive carbon­yl–carbonyl n→π* inter­action between the amide and lactone ester groups, specifically – a short contact of 2.709 (2) Å between the amide oxygen atom and ester carbon atom, approach of the amide oxygen atom to the ester carbonyl group along the Bürgi–Dunitz trajectory, at 99.1 (1)°, and pyramidalization of the ester carbonyl group by 1.1 (1)°. Moreover, a similar n→π* inter­action is observed for the amide carbonyl group approached by the ketone oxygen donor. These inter­actions apparently affect the conformation of the uncomplexed mol­ecule, which adopts a different shape when bound to protein receptors. In the crystal, the mol­ecules form translational chains along the a axis via N—H⋯O hydrogen bonds. International Union of Crystallography 2016-01-09 /pmc/articles/PMC4770979/ /pubmed/26958372 http://dx.doi.org/10.1107/S2056989015024913 Text en © Newberry and Raines 2016 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Communications
Newberry, R.W.
Raines, R.T.
Crystal structure of N-(3-oxo­butano­yl)-l-homoserine lactone
title Crystal structure of N-(3-oxo­butano­yl)-l-homoserine lactone
title_full Crystal structure of N-(3-oxo­butano­yl)-l-homoserine lactone
title_fullStr Crystal structure of N-(3-oxo­butano­yl)-l-homoserine lactone
title_full_unstemmed Crystal structure of N-(3-oxo­butano­yl)-l-homoserine lactone
title_short Crystal structure of N-(3-oxo­butano­yl)-l-homoserine lactone
title_sort crystal structure of n-(3-oxo­butano­yl)-l-homoserine lactone
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4770979/
https://www.ncbi.nlm.nih.gov/pubmed/26958372
http://dx.doi.org/10.1107/S2056989015024913
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