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Crystal structure of N-(3-oxobutanoyl)-l-homoserine lactone
The structure and absolute configuration of the title compound, C(8)H(11)NO(4), which is a known quorum-sensing modulator, have been determined. The molecule exhibits signs of an intramolecular attractive carbonyl–carbonyl n→π* interaction between the amide and lactone ester groups, specifically...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4770979/ https://www.ncbi.nlm.nih.gov/pubmed/26958372 http://dx.doi.org/10.1107/S2056989015024913 |
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author | Newberry, R.W. Raines, R.T. |
author_facet | Newberry, R.W. Raines, R.T. |
author_sort | Newberry, R.W. |
collection | PubMed |
description | The structure and absolute configuration of the title compound, C(8)H(11)NO(4), which is a known quorum-sensing modulator, have been determined. The molecule exhibits signs of an intramolecular attractive carbonyl–carbonyl n→π* interaction between the amide and lactone ester groups, specifically – a short contact of 2.709 (2) Å between the amide oxygen atom and ester carbon atom, approach of the amide oxygen atom to the ester carbonyl group along the Bürgi–Dunitz trajectory, at 99.1 (1)°, and pyramidalization of the ester carbonyl group by 1.1 (1)°. Moreover, a similar n→π* interaction is observed for the amide carbonyl group approached by the ketone oxygen donor. These interactions apparently affect the conformation of the uncomplexed molecule, which adopts a different shape when bound to protein receptors. In the crystal, the molecules form translational chains along the a axis via N—H⋯O hydrogen bonds. |
format | Online Article Text |
id | pubmed-4770979 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-47709792016-03-08 Crystal structure of N-(3-oxobutanoyl)-l-homoserine lactone Newberry, R.W. Raines, R.T. Acta Crystallogr E Crystallogr Commun Research Communications The structure and absolute configuration of the title compound, C(8)H(11)NO(4), which is a known quorum-sensing modulator, have been determined. The molecule exhibits signs of an intramolecular attractive carbonyl–carbonyl n→π* interaction between the amide and lactone ester groups, specifically – a short contact of 2.709 (2) Å between the amide oxygen atom and ester carbon atom, approach of the amide oxygen atom to the ester carbonyl group along the Bürgi–Dunitz trajectory, at 99.1 (1)°, and pyramidalization of the ester carbonyl group by 1.1 (1)°. Moreover, a similar n→π* interaction is observed for the amide carbonyl group approached by the ketone oxygen donor. These interactions apparently affect the conformation of the uncomplexed molecule, which adopts a different shape when bound to protein receptors. In the crystal, the molecules form translational chains along the a axis via N—H⋯O hydrogen bonds. International Union of Crystallography 2016-01-09 /pmc/articles/PMC4770979/ /pubmed/26958372 http://dx.doi.org/10.1107/S2056989015024913 Text en © Newberry and Raines 2016 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Communications Newberry, R.W. Raines, R.T. Crystal structure of N-(3-oxobutanoyl)-l-homoserine lactone |
title | Crystal structure of N-(3-oxobutanoyl)-l-homoserine lactone |
title_full | Crystal structure of N-(3-oxobutanoyl)-l-homoserine lactone |
title_fullStr | Crystal structure of N-(3-oxobutanoyl)-l-homoserine lactone |
title_full_unstemmed | Crystal structure of N-(3-oxobutanoyl)-l-homoserine lactone |
title_short | Crystal structure of N-(3-oxobutanoyl)-l-homoserine lactone |
title_sort | crystal structure of n-(3-oxobutanoyl)-l-homoserine lactone |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4770979/ https://www.ncbi.nlm.nih.gov/pubmed/26958372 http://dx.doi.org/10.1107/S2056989015024913 |
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