Cargando…
ADEPT, a dynamic next generation sequencing data error-detection program with trimming
BACKGROUND: Illumina is the most widely used next generation sequencing technology and produces millions of short reads that contain errors. These sequencing errors constitute a major problem in applications such as de novo genome assembly, metagenomics analysis and single nucleotide polymorphism di...
Autores principales: | Feng, Shihai, Lo, Chien-Chi, Li, Po-E, Chain, Patrick S. G. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4772517/ https://www.ncbi.nlm.nih.gov/pubmed/26928302 http://dx.doi.org/10.1186/s12859-016-0967-z |
Ejemplares similares
-
Rapid evaluation and quality control of next generation sequencing data with FaQCs
por: Lo, Chien-Chi, et al.
Publicado: (2014) -
ADEPT: a domain independent sequence alignment strategy for gpu architectures
por: Awan, Muaaz G., et al.
Publicado: (2020) -
GemSIM: general, error-model based simulator of next-generation sequencing data
por: McElroy, Kerensa E, et al.
Publicado: (2012) -
QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform
por: Shrestha, Ram Krishna, et al.
Publicado: (2014) -
ANGSD: Analysis of Next Generation Sequencing Data
por: Korneliussen, Thorfinn Sand, et al.
Publicado: (2014)