High-quality genome sequence and description of Paenibacillus dakarensis sp. nov.

Strain FF9T was isolated in Dakar (Senegal) from a blood-culture taken from a 16-month-old child. MALDI-TOF analysis did not allow for identification. After sequencing, strain FF9T exhibited 98.18% similarity with the 16SrRNA sequence of Paenibacillus uliginis. A polyphasic study of phenotypic and g...

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Autores principales: Lo, C.I., Sankar, S.A., Fall, B., Sambe-Ba, B., Mediannikov, O., Robert, C., Faye, N., Wade, B., Raoult, D., Fournier, P.-E., Fenollar, F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
New Microbes in Humans
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4773451/
https://www.ncbi.nlm.nih.gov/pubmed/26958345
http://dx.doi.org/10.1016/j.nmni.2016.01.011
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author Lo, C.I.
Sankar, S.A.
Fall, B.
Sambe-Ba, B.
Mediannikov, O.
Robert, C.
Faye, N.
Wade, B.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_facet Lo, C.I.
Sankar, S.A.
Fall, B.
Sambe-Ba, B.
Mediannikov, O.
Robert, C.
Faye, N.
Wade, B.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_sort Lo, C.I.
collection PubMed
description Strain FF9T was isolated in Dakar (Senegal) from a blood-culture taken from a 16-month-old child. MALDI-TOF analysis did not allow for identification. After sequencing, strain FF9T exhibited 98.18% similarity with the 16SrRNA sequence of Paenibacillus uliginis. A polyphasic study of phenotypic and genomic analyses showed that strain FF9T is Gram variable, catalase-positive, and presents a genome of 4,569,428 bp (one chromosome but no plasmid) with 4,427genes (4,352 protein-coding and 75 RNA genes (including 3 rRNA operons). The G+C content is 45.7%. On the basis of these genomic and phenotypic data analyses, we propose the creation of Paenibacillus dakarensis strain FF9T.
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spelling pubmed-47734512016-03-08 High-quality genome sequence and description of Paenibacillus dakarensis sp. nov. Lo, C.I. Sankar, S.A. Fall, B. Sambe-Ba, B. Mediannikov, O. Robert, C. Faye, N. Wade, B. Raoult, D. Fournier, P.-E. Fenollar, F. New Microbes New Infect New Microbes in Humans Strain FF9T was isolated in Dakar (Senegal) from a blood-culture taken from a 16-month-old child. MALDI-TOF analysis did not allow for identification. After sequencing, strain FF9T exhibited 98.18% similarity with the 16SrRNA sequence of Paenibacillus uliginis. A polyphasic study of phenotypic and genomic analyses showed that strain FF9T is Gram variable, catalase-positive, and presents a genome of 4,569,428 bp (one chromosome but no plasmid) with 4,427genes (4,352 protein-coding and 75 RNA genes (including 3 rRNA operons). The G+C content is 45.7%. On the basis of these genomic and phenotypic data analyses, we propose the creation of Paenibacillus dakarensis strain FF9T. Elsevier 2016-01-22 /pmc/articles/PMC4773451/ /pubmed/26958345 http://dx.doi.org/10.1016/j.nmni.2016.01.011 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle New Microbes in Humans
Lo, C.I.
Sankar, S.A.
Fall, B.
Sambe-Ba, B.
Mediannikov, O.
Robert, C.
Faye, N.
Wade, B.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
High-quality genome sequence and description of Paenibacillus dakarensis sp. nov.
title High-quality genome sequence and description of Paenibacillus dakarensis sp. nov.
title_full High-quality genome sequence and description of Paenibacillus dakarensis sp. nov.
title_fullStr High-quality genome sequence and description of Paenibacillus dakarensis sp. nov.
title_full_unstemmed High-quality genome sequence and description of Paenibacillus dakarensis sp. nov.
title_short High-quality genome sequence and description of Paenibacillus dakarensis sp. nov.
title_sort high-quality genome sequence and description of paenibacillus dakarensis sp. nov.
topic New Microbes in Humans
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4773451/
https://www.ncbi.nlm.nih.gov/pubmed/26958345
http://dx.doi.org/10.1016/j.nmni.2016.01.011
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