Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5

Paenibacillus ihumii sp. nov. strain AT5 (= CSUR 1981 = DSM 100664) is the type strain of P. ihumii. This bacterium was isolated from a stool sample from a morbidly obese French patient using the culturomics approach. The genome of this Gram-negative, facultative anaerobic, motile and spore-forming...

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Autores principales: Togo, A.H., Khelaifia, S., Lagier, J.-C., Caputo, A., Robert, C., Fournier, P.-E., Maraninchi, M., Valero, R., Raoult, D., Million, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Taxonogenomics: Genome of a New Organism
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4773480/
https://www.ncbi.nlm.nih.gov/pubmed/26958346
http://dx.doi.org/10.1016/j.nmni.2016.01.013
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author Togo, A.H.
Khelaifia, S.
Lagier, J.-C.
Caputo, A.
Robert, C.
Fournier, P.-E.
Maraninchi, M.
Valero, R.
Raoult, D.
Million, M.
author_facet Togo, A.H.
Khelaifia, S.
Lagier, J.-C.
Caputo, A.
Robert, C.
Fournier, P.-E.
Maraninchi, M.
Valero, R.
Raoult, D.
Million, M.
author_sort Togo, A.H.
collection PubMed
description Paenibacillus ihumii sp. nov. strain AT5 (= CSUR 1981 = DSM 100664) is the type strain of P. ihumii. This bacterium was isolated from a stool sample from a morbidly obese French patient using the culturomics approach. The genome of this Gram-negative, facultative anaerobic, motile and spore-forming bacillus is 5 924 686 bp long. Genomic analysis identified 253 (5%) of 3812 genes as ORFans and at least 2599 (50.03%) of 5194 orthologous proteins not shared with the closest phylogenetic species.
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spelling pubmed-47734802016-03-08 Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5 Togo, A.H. Khelaifia, S. Lagier, J.-C. Caputo, A. Robert, C. Fournier, P.-E. Maraninchi, M. Valero, R. Raoult, D. Million, M. New Microbes New Infect Taxonogenomics: Genome of a New Organism Paenibacillus ihumii sp. nov. strain AT5 (= CSUR 1981 = DSM 100664) is the type strain of P. ihumii. This bacterium was isolated from a stool sample from a morbidly obese French patient using the culturomics approach. The genome of this Gram-negative, facultative anaerobic, motile and spore-forming bacillus is 5 924 686 bp long. Genomic analysis identified 253 (5%) of 3812 genes as ORFans and at least 2599 (50.03%) of 5194 orthologous proteins not shared with the closest phylogenetic species. Elsevier 2016-01-29 /pmc/articles/PMC4773480/ /pubmed/26958346 http://dx.doi.org/10.1016/j.nmni.2016.01.013 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Taxonogenomics: Genome of a New Organism
Togo, A.H.
Khelaifia, S.
Lagier, J.-C.
Caputo, A.
Robert, C.
Fournier, P.-E.
Maraninchi, M.
Valero, R.
Raoult, D.
Million, M.
Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5
title Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5
title_full Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5
title_fullStr Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5
title_full_unstemmed Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5
title_short Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5
title_sort noncontiguous finished genome sequence and description of paenibacillus ihumii sp. nov. strain at5
topic Taxonogenomics: Genome of a New Organism
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4773480/
https://www.ncbi.nlm.nih.gov/pubmed/26958346
http://dx.doi.org/10.1016/j.nmni.2016.01.013
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