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Real-World-Time Simulation of Memory Consolidation in a Large-Scale Cerebellar Model

We report development of a large-scale spiking network model of the cerebellum composed of more than 1 million neurons. The model is implemented on graphics processing units (GPUs), which are dedicated hardware for parallel computing. Using 4 GPUs simultaneously, we achieve realtime simulation, in w...

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Detalles Bibliográficos
Autores principales: Gosui, Masato, Yamazaki, Tadashi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4776399/
https://www.ncbi.nlm.nih.gov/pubmed/26973472
http://dx.doi.org/10.3389/fnana.2016.00021
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author Gosui, Masato
Yamazaki, Tadashi
author_facet Gosui, Masato
Yamazaki, Tadashi
author_sort Gosui, Masato
collection PubMed
description We report development of a large-scale spiking network model of the cerebellum composed of more than 1 million neurons. The model is implemented on graphics processing units (GPUs), which are dedicated hardware for parallel computing. Using 4 GPUs simultaneously, we achieve realtime simulation, in which computer simulation of cerebellar activity for 1 s completes within 1 s in the real-world time, with temporal resolution of 1 ms. This allows us to carry out a very long-term computer simulation of cerebellar activity in a practical time with millisecond temporal resolution. Using the model, we carry out computer simulation of long-term gain adaptation of optokinetic response (OKR) eye movements for 5 days aimed to study the neural mechanisms of posttraining memory consolidation. The simulation results are consistent with animal experiments and our theory of posttraining memory consolidation. These results suggest that realtime computing provides a useful means to study a very slow neural process such as memory consolidation in the brain.
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spelling pubmed-47763992016-03-11 Real-World-Time Simulation of Memory Consolidation in a Large-Scale Cerebellar Model Gosui, Masato Yamazaki, Tadashi Front Neuroanat Neuroscience We report development of a large-scale spiking network model of the cerebellum composed of more than 1 million neurons. The model is implemented on graphics processing units (GPUs), which are dedicated hardware for parallel computing. Using 4 GPUs simultaneously, we achieve realtime simulation, in which computer simulation of cerebellar activity for 1 s completes within 1 s in the real-world time, with temporal resolution of 1 ms. This allows us to carry out a very long-term computer simulation of cerebellar activity in a practical time with millisecond temporal resolution. Using the model, we carry out computer simulation of long-term gain adaptation of optokinetic response (OKR) eye movements for 5 days aimed to study the neural mechanisms of posttraining memory consolidation. The simulation results are consistent with animal experiments and our theory of posttraining memory consolidation. These results suggest that realtime computing provides a useful means to study a very slow neural process such as memory consolidation in the brain. Frontiers Media S.A. 2016-03-03 /pmc/articles/PMC4776399/ /pubmed/26973472 http://dx.doi.org/10.3389/fnana.2016.00021 Text en Copyright © 2016 Gosui and Yamazaki. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Gosui, Masato
Yamazaki, Tadashi
Real-World-Time Simulation of Memory Consolidation in a Large-Scale Cerebellar Model
title Real-World-Time Simulation of Memory Consolidation in a Large-Scale Cerebellar Model
title_full Real-World-Time Simulation of Memory Consolidation in a Large-Scale Cerebellar Model
title_fullStr Real-World-Time Simulation of Memory Consolidation in a Large-Scale Cerebellar Model
title_full_unstemmed Real-World-Time Simulation of Memory Consolidation in a Large-Scale Cerebellar Model
title_short Real-World-Time Simulation of Memory Consolidation in a Large-Scale Cerebellar Model
title_sort real-world-time simulation of memory consolidation in a large-scale cerebellar model
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4776399/
https://www.ncbi.nlm.nih.gov/pubmed/26973472
http://dx.doi.org/10.3389/fnana.2016.00021
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