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Performance of Seven Tree Breeding Strategies Under Conditions of Inbreeding Depression

In the domestication and breeding of tree species that suffer from inbreeding depression (ID), the long-term performance of different breeding strategies is poorly known. Therefore, seven tree breeding strategies including single population, subline, selfing, and nucleus breeding were simulated usin...

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Autores principales: Wu, Harry X., Hallingbäck, Henrik R., Sánchez, Leopoldo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Genetics Society of America 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4777116/
https://www.ncbi.nlm.nih.gov/pubmed/26739644
http://dx.doi.org/10.1534/g3.115.025767
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author Wu, Harry X.
Hallingbäck, Henrik R.
Sánchez, Leopoldo
author_facet Wu, Harry X.
Hallingbäck, Henrik R.
Sánchez, Leopoldo
author_sort Wu, Harry X.
collection PubMed
description In the domestication and breeding of tree species that suffer from inbreeding depression (ID), the long-term performance of different breeding strategies is poorly known. Therefore, seven tree breeding strategies including single population, subline, selfing, and nucleus breeding were simulated using a multi-locus model with additive, partial, and complete dominance allele effects, and with intermediate, U-shaped, and major allele distributions. The strategies were compared for genetic gain, inbreeding accumulation, capacity to show ID, the frequencies and fixations of unfavorable alleles, and genetic variances in breeding and production populations. Measured by genetic gain of production population, the nucleus breeding and the single breeding population with mass selection strategies were equal or superior to subline and single breeding population with within-family selection strategies in all simulated scenarios, in spite of their higher inbreeding coefficients. Inbreeding and cross-breeding effectively decreased ID and could in some scenarios produce genetic gains during the first few generations. However, in all scenarios, considerable fixation of unfavorable alleles rendered the purging performance of selfing and cross-breeding strategies ineffective, and resulted in substantial inferiority in comparison to the other strategies in the long-term.
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spelling pubmed-47771162016-03-03 Performance of Seven Tree Breeding Strategies Under Conditions of Inbreeding Depression Wu, Harry X. Hallingbäck, Henrik R. Sánchez, Leopoldo G3 (Bethesda) Investigations In the domestication and breeding of tree species that suffer from inbreeding depression (ID), the long-term performance of different breeding strategies is poorly known. Therefore, seven tree breeding strategies including single population, subline, selfing, and nucleus breeding were simulated using a multi-locus model with additive, partial, and complete dominance allele effects, and with intermediate, U-shaped, and major allele distributions. The strategies were compared for genetic gain, inbreeding accumulation, capacity to show ID, the frequencies and fixations of unfavorable alleles, and genetic variances in breeding and production populations. Measured by genetic gain of production population, the nucleus breeding and the single breeding population with mass selection strategies were equal or superior to subline and single breeding population with within-family selection strategies in all simulated scenarios, in spite of their higher inbreeding coefficients. Inbreeding and cross-breeding effectively decreased ID and could in some scenarios produce genetic gains during the first few generations. However, in all scenarios, considerable fixation of unfavorable alleles rendered the purging performance of selfing and cross-breeding strategies ineffective, and resulted in substantial inferiority in comparison to the other strategies in the long-term. Genetics Society of America 2016-01-04 /pmc/articles/PMC4777116/ /pubmed/26739644 http://dx.doi.org/10.1534/g3.115.025767 Text en Copyright © 2016 Wu et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Investigations
Wu, Harry X.
Hallingbäck, Henrik R.
Sánchez, Leopoldo
Performance of Seven Tree Breeding Strategies Under Conditions of Inbreeding Depression
title Performance of Seven Tree Breeding Strategies Under Conditions of Inbreeding Depression
title_full Performance of Seven Tree Breeding Strategies Under Conditions of Inbreeding Depression
title_fullStr Performance of Seven Tree Breeding Strategies Under Conditions of Inbreeding Depression
title_full_unstemmed Performance of Seven Tree Breeding Strategies Under Conditions of Inbreeding Depression
title_short Performance of Seven Tree Breeding Strategies Under Conditions of Inbreeding Depression
title_sort performance of seven tree breeding strategies under conditions of inbreeding depression
topic Investigations
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4777116/
https://www.ncbi.nlm.nih.gov/pubmed/26739644
http://dx.doi.org/10.1534/g3.115.025767
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