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A liquid-crystal-based DNA biosensor for pathogen detection

A liquid-crystal (LC)-filled transmission electron microscopy (TEM) grid cell coated with the cationic surfactant dodecyltrimethylammonium bromide (DTAB), to which a single-stranded deoxyribonucleic acid probe (ssDNA(probe)) was adsorbed at the LC/aqueous interface (TEM(DTAB/DNA)), was applied for t...

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Autores principales: Khan, Mashooq, Khan, Abdur Rahim, Shin, Jae-Ho, Park, Soo-Young
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778015/
https://www.ncbi.nlm.nih.gov/pubmed/26940532
http://dx.doi.org/10.1038/srep22676
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author Khan, Mashooq
Khan, Abdur Rahim
Shin, Jae-Ho
Park, Soo-Young
author_facet Khan, Mashooq
Khan, Abdur Rahim
Shin, Jae-Ho
Park, Soo-Young
author_sort Khan, Mashooq
collection PubMed
description A liquid-crystal (LC)-filled transmission electron microscopy (TEM) grid cell coated with the cationic surfactant dodecyltrimethylammonium bromide (DTAB), to which a single-stranded deoxyribonucleic acid probe (ssDNA(probe)) was adsorbed at the LC/aqueous interface (TEM(DTAB/DNA)), was applied for the highly specific detection of target DNA molecules. The DTAB-coated E7 (used LC mixture) in the TEM grid (TEM(DTAB)) exhibited a homeotropic orientation, and changed to a planar orientation upon adsorption of the ssDNA(probe). The TEM(DTAB/DNA) was then exposed to complementary (target) ssDNA, which resulted in a planar-to-homeotropic configurational change of E7 that could be observed through a polarized optical microscope under crossed polarizers. The optimum adsorption density (2 μM) of ssDNA(probe) enabled the detection of ≥0.05 nM complementary ssDNA. This TEM(DTAB/DNA) biosensor could differentiate complementary ssDNA from mismatched ssDNA as well as double-stranded DNA. It also successfully detected the genomic DNAs of the bacterium Erwinia carotovora and the fungi Rhazictonia solani. Owe to the high specificity, sensitivity, and label-free detection, this biosensor may broaden the applications of LC-based biosensors to pathogen detection.
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spelling pubmed-47780152016-03-09 A liquid-crystal-based DNA biosensor for pathogen detection Khan, Mashooq Khan, Abdur Rahim Shin, Jae-Ho Park, Soo-Young Sci Rep Article A liquid-crystal (LC)-filled transmission electron microscopy (TEM) grid cell coated with the cationic surfactant dodecyltrimethylammonium bromide (DTAB), to which a single-stranded deoxyribonucleic acid probe (ssDNA(probe)) was adsorbed at the LC/aqueous interface (TEM(DTAB/DNA)), was applied for the highly specific detection of target DNA molecules. The DTAB-coated E7 (used LC mixture) in the TEM grid (TEM(DTAB)) exhibited a homeotropic orientation, and changed to a planar orientation upon adsorption of the ssDNA(probe). The TEM(DTAB/DNA) was then exposed to complementary (target) ssDNA, which resulted in a planar-to-homeotropic configurational change of E7 that could be observed through a polarized optical microscope under crossed polarizers. The optimum adsorption density (2 μM) of ssDNA(probe) enabled the detection of ≥0.05 nM complementary ssDNA. This TEM(DTAB/DNA) biosensor could differentiate complementary ssDNA from mismatched ssDNA as well as double-stranded DNA. It also successfully detected the genomic DNAs of the bacterium Erwinia carotovora and the fungi Rhazictonia solani. Owe to the high specificity, sensitivity, and label-free detection, this biosensor may broaden the applications of LC-based biosensors to pathogen detection. Nature Publishing Group 2016-03-04 /pmc/articles/PMC4778015/ /pubmed/26940532 http://dx.doi.org/10.1038/srep22676 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Khan, Mashooq
Khan, Abdur Rahim
Shin, Jae-Ho
Park, Soo-Young
A liquid-crystal-based DNA biosensor for pathogen detection
title A liquid-crystal-based DNA biosensor for pathogen detection
title_full A liquid-crystal-based DNA biosensor for pathogen detection
title_fullStr A liquid-crystal-based DNA biosensor for pathogen detection
title_full_unstemmed A liquid-crystal-based DNA biosensor for pathogen detection
title_short A liquid-crystal-based DNA biosensor for pathogen detection
title_sort liquid-crystal-based dna biosensor for pathogen detection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778015/
https://www.ncbi.nlm.nih.gov/pubmed/26940532
http://dx.doi.org/10.1038/srep22676
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