Cargando…
Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography
Diffuse optical tomography (DOT) is a relatively low cost and portable imaging modality for reconstruction of optical properties in a highly scattering medium, such as human tissue. The inverse problem in DOT is highly ill-posed, making reconstruction of high-quality image a critical challenge. Beca...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778023/ https://www.ncbi.nlm.nih.gov/pubmed/26940661 http://dx.doi.org/10.1038/srep22242 |
_version_ | 1782419386755186688 |
---|---|
author | Bhowmik, Tanmoy Liu, Hanli Ye, Zhou Oraintara, Soontorn |
author_facet | Bhowmik, Tanmoy Liu, Hanli Ye, Zhou Oraintara, Soontorn |
author_sort | Bhowmik, Tanmoy |
collection | PubMed |
description | Diffuse optical tomography (DOT) is a relatively low cost and portable imaging modality for reconstruction of optical properties in a highly scattering medium, such as human tissue. The inverse problem in DOT is highly ill-posed, making reconstruction of high-quality image a critical challenge. Because of the nature of sparsity in DOT, sparsity regularization has been utilized to achieve high-quality DOT reconstruction. However, conventional approaches using sparse optimization are computationally expensive and have no selection criteria to optimize the regularization parameter. In this paper, a novel algorithm, Dimensionality Reduction based Optimization for DOT (DRO-DOT), is proposed. It reduces the dimensionality of the inverse DOT problem by reducing the number of unknowns in two steps and thereby makes the overall process fast. First, it constructs a low resolution voxel basis based on the sensing-matrix properties to find an image support. Second, it reconstructs the sparse image inside this support. To compensate for the reduced sensitivity with increasing depth, depth compensation is incorporated in DRO-DOT. An efficient method to optimally select the regularization parameter is proposed for obtaining a high-quality DOT image. DRO-DOT is also able to reconstruct high-resolution images even with a limited number of optodes in a spatially limited imaging set-up. |
format | Online Article Text |
id | pubmed-4778023 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47780232016-03-09 Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography Bhowmik, Tanmoy Liu, Hanli Ye, Zhou Oraintara, Soontorn Sci Rep Article Diffuse optical tomography (DOT) is a relatively low cost and portable imaging modality for reconstruction of optical properties in a highly scattering medium, such as human tissue. The inverse problem in DOT is highly ill-posed, making reconstruction of high-quality image a critical challenge. Because of the nature of sparsity in DOT, sparsity regularization has been utilized to achieve high-quality DOT reconstruction. However, conventional approaches using sparse optimization are computationally expensive and have no selection criteria to optimize the regularization parameter. In this paper, a novel algorithm, Dimensionality Reduction based Optimization for DOT (DRO-DOT), is proposed. It reduces the dimensionality of the inverse DOT problem by reducing the number of unknowns in two steps and thereby makes the overall process fast. First, it constructs a low resolution voxel basis based on the sensing-matrix properties to find an image support. Second, it reconstructs the sparse image inside this support. To compensate for the reduced sensitivity with increasing depth, depth compensation is incorporated in DRO-DOT. An efficient method to optimally select the regularization parameter is proposed for obtaining a high-quality DOT image. DRO-DOT is also able to reconstruct high-resolution images even with a limited number of optodes in a spatially limited imaging set-up. Nature Publishing Group 2016-03-04 /pmc/articles/PMC4778023/ /pubmed/26940661 http://dx.doi.org/10.1038/srep22242 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Bhowmik, Tanmoy Liu, Hanli Ye, Zhou Oraintara, Soontorn Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography |
title | Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography |
title_full | Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography |
title_fullStr | Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography |
title_full_unstemmed | Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography |
title_short | Dimensionality Reduction Based Optimization Algorithm for Sparse 3-D Image Reconstruction in Diffuse Optical Tomography |
title_sort | dimensionality reduction based optimization algorithm for sparse 3-d image reconstruction in diffuse optical tomography |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778023/ https://www.ncbi.nlm.nih.gov/pubmed/26940661 http://dx.doi.org/10.1038/srep22242 |
work_keys_str_mv | AT bhowmiktanmoy dimensionalityreductionbasedoptimizationalgorithmforsparse3dimagereconstructionindiffuseopticaltomography AT liuhanli dimensionalityreductionbasedoptimizationalgorithmforsparse3dimagereconstructionindiffuseopticaltomography AT yezhou dimensionalityreductionbasedoptimizationalgorithmforsparse3dimagereconstructionindiffuseopticaltomography AT oraintarasoontorn dimensionalityreductionbasedoptimizationalgorithmforsparse3dimagereconstructionindiffuseopticaltomography |