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Clonality Analysis of Immunoglobulin Gene Rearrangement by Next-Generation Sequencing in Endemic Burkitt Lymphoma Suggests Antigen Drive Activation of BCR as Opposed to Sporadic Burkitt Lymphoma
Objectives: Recent studies using next-generation sequencing (NGS) analysis disclosed the importance of the intrinsic activation of the B-cell receptor (BCR) pathway in the pathogenesis of sporadic Burkitt lymphoma (sBL) due to mutations of TCF3/ID3 genes. Since no definitive data are available on th...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778259/ https://www.ncbi.nlm.nih.gov/pubmed/26712879 http://dx.doi.org/10.1093/ajcp/aqv011 |
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author | Amato, Teresa Abate, Francesco Piccaluga, Pierpaolo Iacono, Michele Fallerini, Chiara Renieri, Alessandra De Falco, Giulia Ambrosio, Maria Raffaella Mourmouras, Vaselious Ogwang, Martin Calbi, Valeria Rabadan, Roul Hummel, Michael Pileri, Stefano Leoncini, Lorenzo Bellan, Cristiana |
author_facet | Amato, Teresa Abate, Francesco Piccaluga, Pierpaolo Iacono, Michele Fallerini, Chiara Renieri, Alessandra De Falco, Giulia Ambrosio, Maria Raffaella Mourmouras, Vaselious Ogwang, Martin Calbi, Valeria Rabadan, Roul Hummel, Michael Pileri, Stefano Leoncini, Lorenzo Bellan, Cristiana |
author_sort | Amato, Teresa |
collection | PubMed |
description | Objectives: Recent studies using next-generation sequencing (NGS) analysis disclosed the importance of the intrinsic activation of the B-cell receptor (BCR) pathway in the pathogenesis of sporadic Burkitt lymphoma (sBL) due to mutations of TCF3/ID3 genes. Since no definitive data are available on the genetic landscape of endemic Burkitt (eBL), we first assessed the mutation frequency of TCF3/ID3 in eBL compared with sBL and subsequently the somatic hypermutation status of the BCR to answer whether an extrinsic activation of BCR signaling could also be demonstrated in Burkitt lymphoma. Methods: We assessed the mutations of TCF3/ID3 by RNAseq and the BCR status by NGS analysis of the immunoglobulin genes (IGs). Results: We detected mutations of TCF3/ID3 in about 30% of the eBL cases. This rate is significantly lower than that detected in sBL (64%). The NGS analysis of IGs revealed intraclonal diversity, suggesting an active targeted somatic hypermutation process in eBL compared with sBL. Conclusions: These findings support the view that the antigenic pressure plays a key role in the pathogenetic pathways of eBL, which may be partially distinct from those driving sBL development. |
format | Online Article Text |
id | pubmed-4778259 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-47782592016-07-14 Clonality Analysis of Immunoglobulin Gene Rearrangement by Next-Generation Sequencing in Endemic Burkitt Lymphoma Suggests Antigen Drive Activation of BCR as Opposed to Sporadic Burkitt Lymphoma Amato, Teresa Abate, Francesco Piccaluga, Pierpaolo Iacono, Michele Fallerini, Chiara Renieri, Alessandra De Falco, Giulia Ambrosio, Maria Raffaella Mourmouras, Vaselious Ogwang, Martin Calbi, Valeria Rabadan, Roul Hummel, Michael Pileri, Stefano Leoncini, Lorenzo Bellan, Cristiana Am J Clin Pathol Original Articles Objectives: Recent studies using next-generation sequencing (NGS) analysis disclosed the importance of the intrinsic activation of the B-cell receptor (BCR) pathway in the pathogenesis of sporadic Burkitt lymphoma (sBL) due to mutations of TCF3/ID3 genes. Since no definitive data are available on the genetic landscape of endemic Burkitt (eBL), we first assessed the mutation frequency of TCF3/ID3 in eBL compared with sBL and subsequently the somatic hypermutation status of the BCR to answer whether an extrinsic activation of BCR signaling could also be demonstrated in Burkitt lymphoma. Methods: We assessed the mutations of TCF3/ID3 by RNAseq and the BCR status by NGS analysis of the immunoglobulin genes (IGs). Results: We detected mutations of TCF3/ID3 in about 30% of the eBL cases. This rate is significantly lower than that detected in sBL (64%). The NGS analysis of IGs revealed intraclonal diversity, suggesting an active targeted somatic hypermutation process in eBL compared with sBL. Conclusions: These findings support the view that the antigenic pressure plays a key role in the pathogenetic pathways of eBL, which may be partially distinct from those driving sBL development. Oxford University Press 2016-01 2015-12-23 /pmc/articles/PMC4778259/ /pubmed/26712879 http://dx.doi.org/10.1093/ajcp/aqv011 Text en © American Society for Clinical Pathology, 2016. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Original Articles Amato, Teresa Abate, Francesco Piccaluga, Pierpaolo Iacono, Michele Fallerini, Chiara Renieri, Alessandra De Falco, Giulia Ambrosio, Maria Raffaella Mourmouras, Vaselious Ogwang, Martin Calbi, Valeria Rabadan, Roul Hummel, Michael Pileri, Stefano Leoncini, Lorenzo Bellan, Cristiana Clonality Analysis of Immunoglobulin Gene Rearrangement by Next-Generation Sequencing in Endemic Burkitt Lymphoma Suggests Antigen Drive Activation of BCR as Opposed to Sporadic Burkitt Lymphoma |
title | Clonality Analysis of Immunoglobulin Gene Rearrangement by Next-Generation Sequencing in Endemic Burkitt Lymphoma Suggests Antigen Drive Activation of BCR as Opposed to Sporadic Burkitt Lymphoma |
title_full | Clonality Analysis of Immunoglobulin Gene Rearrangement by Next-Generation Sequencing in Endemic Burkitt Lymphoma Suggests Antigen Drive Activation of BCR as Opposed to Sporadic Burkitt Lymphoma |
title_fullStr | Clonality Analysis of Immunoglobulin Gene Rearrangement by Next-Generation Sequencing in Endemic Burkitt Lymphoma Suggests Antigen Drive Activation of BCR as Opposed to Sporadic Burkitt Lymphoma |
title_full_unstemmed | Clonality Analysis of Immunoglobulin Gene Rearrangement by Next-Generation Sequencing in Endemic Burkitt Lymphoma Suggests Antigen Drive Activation of BCR as Opposed to Sporadic Burkitt Lymphoma |
title_short | Clonality Analysis of Immunoglobulin Gene Rearrangement by Next-Generation Sequencing in Endemic Burkitt Lymphoma Suggests Antigen Drive Activation of BCR as Opposed to Sporadic Burkitt Lymphoma |
title_sort | clonality analysis of immunoglobulin gene rearrangement by next-generation sequencing in endemic burkitt lymphoma suggests antigen drive activation of bcr as opposed to sporadic burkitt lymphoma |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778259/ https://www.ncbi.nlm.nih.gov/pubmed/26712879 http://dx.doi.org/10.1093/ajcp/aqv011 |
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