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Complete genome sequence of Acinetobacter baumannii XH386 (ST208), a multi-drug resistant bacteria isolated from pediatric hospital in China

Acinetobacter baumannii is an important bacterium that emerged as a significant nosocomial pathogen worldwide. The rise of A. baumannii was due to its multi-drug resistance (MDR), while it was difficult to treat multi-drug resistant A. baumannii with antibiotics, especially in pediatric patients for...

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Autores principales: Fang, Youhong, Quan, Jingjing, Hua, Xiaoting, Feng, Ye, Li, Xi, Wang, Jianfeng, Ruan, Zhi, Shang, Shiqiang, Yu, Yunsong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778617/
https://www.ncbi.nlm.nih.gov/pubmed/26981403
http://dx.doi.org/10.1016/j.gdata.2015.12.002
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author Fang, Youhong
Quan, Jingjing
Hua, Xiaoting
Feng, Ye
Li, Xi
Wang, Jianfeng
Ruan, Zhi
Shang, Shiqiang
Yu, Yunsong
author_facet Fang, Youhong
Quan, Jingjing
Hua, Xiaoting
Feng, Ye
Li, Xi
Wang, Jianfeng
Ruan, Zhi
Shang, Shiqiang
Yu, Yunsong
author_sort Fang, Youhong
collection PubMed
description Acinetobacter baumannii is an important bacterium that emerged as a significant nosocomial pathogen worldwide. The rise of A. baumannii was due to its multi-drug resistance (MDR), while it was difficult to treat multi-drug resistant A. baumannii with antibiotics, especially in pediatric patients for the therapeutic options with antibiotics were quite limited in pediatric patients. A. baumannii ST208 was identified as predominant sequence type of carbapenem resistant A. baumannii in the United States and China. As we knew, there was no complete genome sequence reproted for A. baumannii ST208, although several whole genome shotgun sequences had been reported. Here, we sequenced the 4087-kilobase (kb) chromosome and 112-kb plasmid of A. baumannii XH386 (ST208), which was isolated from a pediatric hospital in China. The genome of A. baumannii XH386 contained 3968 protein-coding genes and 94 RNA-only encoding genes. Genomic analysis and Minimum inhibitory concentration assay showed that A. baumannii XH386 was multi-drug resistant strain, which showed resistance to most of antibiotics, except for tigecycline. The data may be accessed via the GenBank accession number CP010779 and CP010780.
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spelling pubmed-47786172016-03-15 Complete genome sequence of Acinetobacter baumannii XH386 (ST208), a multi-drug resistant bacteria isolated from pediatric hospital in China Fang, Youhong Quan, Jingjing Hua, Xiaoting Feng, Ye Li, Xi Wang, Jianfeng Ruan, Zhi Shang, Shiqiang Yu, Yunsong Genom Data Data in Brief Acinetobacter baumannii is an important bacterium that emerged as a significant nosocomial pathogen worldwide. The rise of A. baumannii was due to its multi-drug resistance (MDR), while it was difficult to treat multi-drug resistant A. baumannii with antibiotics, especially in pediatric patients for the therapeutic options with antibiotics were quite limited in pediatric patients. A. baumannii ST208 was identified as predominant sequence type of carbapenem resistant A. baumannii in the United States and China. As we knew, there was no complete genome sequence reproted for A. baumannii ST208, although several whole genome shotgun sequences had been reported. Here, we sequenced the 4087-kilobase (kb) chromosome and 112-kb plasmid of A. baumannii XH386 (ST208), which was isolated from a pediatric hospital in China. The genome of A. baumannii XH386 contained 3968 protein-coding genes and 94 RNA-only encoding genes. Genomic analysis and Minimum inhibitory concentration assay showed that A. baumannii XH386 was multi-drug resistant strain, which showed resistance to most of antibiotics, except for tigecycline. The data may be accessed via the GenBank accession number CP010779 and CP010780. Elsevier 2015-12-19 /pmc/articles/PMC4778617/ /pubmed/26981403 http://dx.doi.org/10.1016/j.gdata.2015.12.002 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Fang, Youhong
Quan, Jingjing
Hua, Xiaoting
Feng, Ye
Li, Xi
Wang, Jianfeng
Ruan, Zhi
Shang, Shiqiang
Yu, Yunsong
Complete genome sequence of Acinetobacter baumannii XH386 (ST208), a multi-drug resistant bacteria isolated from pediatric hospital in China
title Complete genome sequence of Acinetobacter baumannii XH386 (ST208), a multi-drug resistant bacteria isolated from pediatric hospital in China
title_full Complete genome sequence of Acinetobacter baumannii XH386 (ST208), a multi-drug resistant bacteria isolated from pediatric hospital in China
title_fullStr Complete genome sequence of Acinetobacter baumannii XH386 (ST208), a multi-drug resistant bacteria isolated from pediatric hospital in China
title_full_unstemmed Complete genome sequence of Acinetobacter baumannii XH386 (ST208), a multi-drug resistant bacteria isolated from pediatric hospital in China
title_short Complete genome sequence of Acinetobacter baumannii XH386 (ST208), a multi-drug resistant bacteria isolated from pediatric hospital in China
title_sort complete genome sequence of acinetobacter baumannii xh386 (st208), a multi-drug resistant bacteria isolated from pediatric hospital in china
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778617/
https://www.ncbi.nlm.nih.gov/pubmed/26981403
http://dx.doi.org/10.1016/j.gdata.2015.12.002
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