Analyses of MYMIV-induced transcriptome in Vigna mungo as revealed by next generation sequencing

Mungbean Yellow Mosaic Virus (MYMIV) is the viral pathogen that causes yellow mosaic disease to a number of legumes including Vigna mungo. VM84 is a recombinant inbred line resistant to MYMIV, developed in our laboratory through introgression of resistance trait from V. mungo line VM-1. Here we pres...

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Detalles Bibliográficos
Autores principales: Ganguli, Sayak, Dey, Avishek, Banik, Rahul, Kundu, Anirban, Pal, Amita
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Lab Resource
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778624/
https://www.ncbi.nlm.nih.gov/pubmed/26981413
http://dx.doi.org/10.1016/j.gdata.2016.01.005
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author Ganguli, Sayak
Dey, Avishek
Banik, Rahul
Kundu, Anirban
Pal, Amita
author_facet Ganguli, Sayak
Dey, Avishek
Banik, Rahul
Kundu, Anirban
Pal, Amita
author_sort Ganguli, Sayak
collection PubMed
description Mungbean Yellow Mosaic Virus (MYMIV) is the viral pathogen that causes yellow mosaic disease to a number of legumes including Vigna mungo. VM84 is a recombinant inbred line resistant to MYMIV, developed in our laboratory through introgression of resistance trait from V. mungo line VM-1. Here we present the quality control passed transcriptome data of mock inoculated (control) and MYMIV-infected VM84, those have already been submitted in Sequence Read Archive (SRX1032950, SRX1082731) of NCBI. QC reports of FASTQ files generated by ‘SeqQC V2.2’ bioinformatics tool.
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spelling pubmed-47786242016-03-15 Analyses of MYMIV-induced transcriptome in Vigna mungo as revealed by next generation sequencing Ganguli, Sayak Dey, Avishek Banik, Rahul Kundu, Anirban Pal, Amita Genom Data Lab Resource Mungbean Yellow Mosaic Virus (MYMIV) is the viral pathogen that causes yellow mosaic disease to a number of legumes including Vigna mungo. VM84 is a recombinant inbred line resistant to MYMIV, developed in our laboratory through introgression of resistance trait from V. mungo line VM-1. Here we present the quality control passed transcriptome data of mock inoculated (control) and MYMIV-infected VM84, those have already been submitted in Sequence Read Archive (SRX1032950, SRX1082731) of NCBI. QC reports of FASTQ files generated by ‘SeqQC V2.2’ bioinformatics tool. Elsevier 2016-01-07 /pmc/articles/PMC4778624/ /pubmed/26981413 http://dx.doi.org/10.1016/j.gdata.2016.01.005 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Lab Resource
Ganguli, Sayak
Dey, Avishek
Banik, Rahul
Kundu, Anirban
Pal, Amita
Analyses of MYMIV-induced transcriptome in Vigna mungo as revealed by next generation sequencing
title Analyses of MYMIV-induced transcriptome in Vigna mungo as revealed by next generation sequencing
title_full Analyses of MYMIV-induced transcriptome in Vigna mungo as revealed by next generation sequencing
title_fullStr Analyses of MYMIV-induced transcriptome in Vigna mungo as revealed by next generation sequencing
title_full_unstemmed Analyses of MYMIV-induced transcriptome in Vigna mungo as revealed by next generation sequencing
title_short Analyses of MYMIV-induced transcriptome in Vigna mungo as revealed by next generation sequencing
title_sort analyses of mymiv-induced transcriptome in vigna mungo as revealed by next generation sequencing
topic Lab Resource
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778624/
https://www.ncbi.nlm.nih.gov/pubmed/26981413
http://dx.doi.org/10.1016/j.gdata.2016.01.005
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