Draft genome of Leisingera aquaemixtae CECT 8399(T), a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea

We report the draft genome sequence and annotation of Leisingera aquaemixtae CECT 8399(T) (DDBJ/EMBL/GenBank accession number CYSR00000000) which comprises 4,614,060 bp, 4313 protein coding genes, 54 tRNA coding genes and 7 rRNA coding genes. General findings of the annotated genome, such as pigment...

Descripción completa

Detalles Bibliográficos
Autores principales: Rodrigo-Torres, Lidia, Pujalte, María J., Arahal, David R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Data in Brief
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778666/
https://www.ncbi.nlm.nih.gov/pubmed/26981415
http://dx.doi.org/10.1016/j.gdata.2016.01.010
_version_ 1782419508715061248
author Rodrigo-Torres, Lidia
Pujalte, María J.
Arahal, David R.
author_facet Rodrigo-Torres, Lidia
Pujalte, María J.
Arahal, David R.
author_sort Rodrigo-Torres, Lidia
collection PubMed
description We report the draft genome sequence and annotation of Leisingera aquaemixtae CECT 8399(T) (DDBJ/EMBL/GenBank accession number CYSR00000000) which comprises 4,614,060 bp, 4313 protein coding genes, 54 tRNA coding genes and 7 rRNA coding genes. General findings of the annotated genome, such as pigment indigoidine operon, phenylacetate oxidation genes or predictable number of replicons, are commented in comparison to other Leisingera species. Average Nucleotide Identity between available genomes of type strains of species of Leisingera and Phaeobacter genera has been calculated to evaluate its current classification.
format Online
Article
Text
id pubmed-4778666
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-47786662016-03-15 Draft genome of Leisingera aquaemixtae CECT 8399(T), a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea Rodrigo-Torres, Lidia Pujalte, María J. Arahal, David R. Genom Data Data in Brief We report the draft genome sequence and annotation of Leisingera aquaemixtae CECT 8399(T) (DDBJ/EMBL/GenBank accession number CYSR00000000) which comprises 4,614,060 bp, 4313 protein coding genes, 54 tRNA coding genes and 7 rRNA coding genes. General findings of the annotated genome, such as pigment indigoidine operon, phenylacetate oxidation genes or predictable number of replicons, are commented in comparison to other Leisingera species. Average Nucleotide Identity between available genomes of type strains of species of Leisingera and Phaeobacter genera has been calculated to evaluate its current classification. Elsevier 2016-01-15 /pmc/articles/PMC4778666/ /pubmed/26981415 http://dx.doi.org/10.1016/j.gdata.2016.01.010 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Rodrigo-Torres, Lidia
Pujalte, María J.
Arahal, David R.
Draft genome of Leisingera aquaemixtae CECT 8399(T), a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title Draft genome of Leisingera aquaemixtae CECT 8399(T), a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_full Draft genome of Leisingera aquaemixtae CECT 8399(T), a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_fullStr Draft genome of Leisingera aquaemixtae CECT 8399(T), a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_full_unstemmed Draft genome of Leisingera aquaemixtae CECT 8399(T), a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_short Draft genome of Leisingera aquaemixtae CECT 8399(T), a member of the Roseobacter clade isolated from a junction of fresh and ocean water in Jeju Island, South Korea
title_sort draft genome of leisingera aquaemixtae cect 8399(t), a member of the roseobacter clade isolated from a junction of fresh and ocean water in jeju island, south korea
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778666/
https://www.ncbi.nlm.nih.gov/pubmed/26981415
http://dx.doi.org/10.1016/j.gdata.2016.01.010
work_keys_str_mv AT rodrigotorreslidia draftgenomeofleisingeraaquaemixtaecect8399tamemberoftheroseobactercladeisolatedfromajunctionoffreshandoceanwaterinjejuislandsouthkorea
AT pujaltemariaj draftgenomeofleisingeraaquaemixtaecect8399tamemberoftheroseobactercladeisolatedfromajunctionoffreshandoceanwaterinjejuislandsouthkorea
AT arahaldavidr draftgenomeofleisingeraaquaemixtaecect8399tamemberoftheroseobactercladeisolatedfromajunctionoffreshandoceanwaterinjejuislandsouthkorea

Ejemplares similares