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Draft genome sequence of Thalassobius mediterraneus CECT 5383(T), a poly-beta-hydroxybutyrate producer

Thalassobius mediterraneus is the type species of the genus Thalassobius and a member of the Roseobacter clade, an abundant representative of marine bacteria. T. mediterraneus XSM19(T) (= CECT 5383(T)) was isolated from the Western Mediterranean coast near Valencia (Spain) in 1989. We present here t...

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Autores principales: Rodrigo-Torres, Lidia, Pujalte, María J., Arahal, David R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778676/
https://www.ncbi.nlm.nih.gov/pubmed/26981416
http://dx.doi.org/10.1016/j.gdata.2016.01.013
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author Rodrigo-Torres, Lidia
Pujalte, María J.
Arahal, David R.
author_facet Rodrigo-Torres, Lidia
Pujalte, María J.
Arahal, David R.
author_sort Rodrigo-Torres, Lidia
collection PubMed
description Thalassobius mediterraneus is the type species of the genus Thalassobius and a member of the Roseobacter clade, an abundant representative of marine bacteria. T. mediterraneus XSM19(T) (= CECT 5383(T)) was isolated from the Western Mediterranean coast near Valencia (Spain) in 1989. We present here the draft genome sequence and annotation of this strain (ENA/DDBJ/NCBI accession number CYSF00000000), which is comprised of 3,431,658 bp distributed in 19 contigs and encodes 10 rRNA genes, 51 tRNA genes and 3276 protein coding genes. Relevant findings are commented, including the complete set of genes required for poly-beta-hydroxybutyrate (PHB) synthesis and genes related to degradation of aromatic compounds.
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spelling pubmed-47786762016-03-15 Draft genome sequence of Thalassobius mediterraneus CECT 5383(T), a poly-beta-hydroxybutyrate producer Rodrigo-Torres, Lidia Pujalte, María J. Arahal, David R. Genom Data Data in Brief Thalassobius mediterraneus is the type species of the genus Thalassobius and a member of the Roseobacter clade, an abundant representative of marine bacteria. T. mediterraneus XSM19(T) (= CECT 5383(T)) was isolated from the Western Mediterranean coast near Valencia (Spain) in 1989. We present here the draft genome sequence and annotation of this strain (ENA/DDBJ/NCBI accession number CYSF00000000), which is comprised of 3,431,658 bp distributed in 19 contigs and encodes 10 rRNA genes, 51 tRNA genes and 3276 protein coding genes. Relevant findings are commented, including the complete set of genes required for poly-beta-hydroxybutyrate (PHB) synthesis and genes related to degradation of aromatic compounds. Elsevier 2016-01-15 /pmc/articles/PMC4778676/ /pubmed/26981416 http://dx.doi.org/10.1016/j.gdata.2016.01.013 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Rodrigo-Torres, Lidia
Pujalte, María J.
Arahal, David R.
Draft genome sequence of Thalassobius mediterraneus CECT 5383(T), a poly-beta-hydroxybutyrate producer
title Draft genome sequence of Thalassobius mediterraneus CECT 5383(T), a poly-beta-hydroxybutyrate producer
title_full Draft genome sequence of Thalassobius mediterraneus CECT 5383(T), a poly-beta-hydroxybutyrate producer
title_fullStr Draft genome sequence of Thalassobius mediterraneus CECT 5383(T), a poly-beta-hydroxybutyrate producer
title_full_unstemmed Draft genome sequence of Thalassobius mediterraneus CECT 5383(T), a poly-beta-hydroxybutyrate producer
title_short Draft genome sequence of Thalassobius mediterraneus CECT 5383(T), a poly-beta-hydroxybutyrate producer
title_sort draft genome sequence of thalassobius mediterraneus cect 5383(t), a poly-beta-hydroxybutyrate producer
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4778676/
https://www.ncbi.nlm.nih.gov/pubmed/26981416
http://dx.doi.org/10.1016/j.gdata.2016.01.013
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