Cargando…

Comparative Validation of Conventional and RNA-Seq Data-Derived Reference Genes for qPCR Expression Studies of Colletotrichum kahawae

Colletotrichum kahawae is an emergent fungal pathogen causing severe epidemics of Coffee Berry Disease on Arabica coffee crops in Africa. Currently, the molecular mechanisms underlying the Coffea arabica—C. kahawae interaction are still poorly understood, as well as the differences in pathogen aggre...

Descripción completa

Detalles Bibliográficos
Autores principales:	Vieira, Ana, Cabral, Ana, Fino, Joana, Azinheira, Helena G., Loureiro, Andreia, Talhinhas, Pedro, Pires, Ana Sofia, Varzea, Vitor, Moncada, Pilar, Oliveira, Helena, Silva, Maria do Céu, Paulo, Octávio S., Batista, Dora
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2016
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4780792/ https://www.ncbi.nlm.nih.gov/pubmed/26950697 http://dx.doi.org/10.1371/journal.pone.0150651

Ejemplares similares

Legitimacy and Implications of Reducing Colletotrichum kahawae to Subspecies in Plant Pathology
por: Batista, Dora, et al.
Publicado: (2017)

Pathological, Morphological, Cytogenomic, Biochemical and Molecular Data Support the Distinction between Colletotrichum cigarro comb. et stat. nov. and Colletotrichum kahawae
por: Cabral, Ana, et al.
Publicado: (2020)

A first insight into the involvement of phytohormones pathways in coffee resistance and susceptibility to Colletotrichum kahawae
por: Diniz, Inês, et al.
Publicado: (2017)

Validation of reference genes for normalization of qPCR gene expression data from Coffea spp. hypocotyls inoculated with Colletotrichum kahawae
por: Figueiredo, Andreia, et al.
Publicado: (2013)

Genome-Wide Signatures of Selection in Colletotrichum kahawae Reveal Candidate Genes Potentially Involved in Pathogenicity and Aggressiveness
por: Vieira, Ana, et al.
Publicado: (2019)

Subcuticular–Intracellular Hemibiotrophy of Colletotrichum lupini in Lupinus mutabilis
por: Guilengue, Norberto, et al.
Publicado: (2022)

Genomic Patterns of Positive Selection at the Origin of Rust Fungi
por: Silva, Diogo N., et al.
Publicado: (2015)

Overview of the functional virulent genome of the coffee leaf rust pathogen Hemileia vastatrix with an emphasis on early stages of infection
por: Talhinhas, Pedro, et al.
Publicado: (2014)

Genome size analyses of Pucciniales reveal the largest fungal genomes
por: Tavares, Sílvia, et al.
Publicado: (2014)

Diploid Nuclei Occur throughout the Life Cycles of Pucciniales Fungi
por: Talhinhas, Pedro, et al.
Publicado: (2023)

A qPCR Assay for the Fast Detection and Quantification of Colletotrichum lupini
por: Kamber, Tim, et al.
Publicado: (2021)

The Colletotrichum acutatum Species Complex as a Model System to Study Evolution and Host Specialization in Plant Pathogens
por: Baroncelli, Riccardo, et al.
Publicado: (2017)

Selection of potential reference genes for RT-qPCR in the plant pathogenic fungus Colletotrichum fructicola
por: Chen, Xingzhou, et al.
Publicado: (2022)

Dietary Antioxidants in Coffee Leaves: Impact of Botanical Origin and Maturity on Chlorogenic Acids and Xanthones
por: Monteiro, Ângelo, et al.
Publicado: (2019)

Comparison between qPCR and RNA-seq reveals challenges of quantifying HLA expression
por: Aguiar, Vitor R. C., et al.
Publicado: (2023)

The family role in children׳s sleep disturbances: Results from a cross-sectional study in a Portuguese Urban pediatric population()
por: Martins, Andreia Luís, et al.
Publicado: (2015)

Influence of SARS-CoV-2 pandemic on sleep habits in a pediatric population
por: Completo, Sara, et al.
Publicado: (2022)

Morphological, Pathological and Genetic Diversity of the Colletotrichum Species, Pathogenic on Solanaceous Vegetable Crops in Bulgaria
por: Manova, Vasilissa, et al.
Publicado: (2022)

Paraneoplastic necrotizing myopathy in a woman with breast cancer: a case report
por: Silvestre, Joana, et al.
Publicado: (2009)

New gene models and alternative splicing in the maize pathogen Colletotrichum graminicola revealed by RNA-Seq analysis
por: Schliebner, Ivo, et al.
Publicado: (2014)

The Brain–Skin Connection and the Pathogenesis of Psoriasis: A Review with a Focus on the Serotonergic System
por: Martins, Ana M., et al.
Publicado: (2020)

Draft Genome Sequence of Colletotrichum acutatum Sensu Lato (Colletotrichum fioriniae)
por: Baroncelli, Riccardo, et al.
Publicado: (2014)

Seasonal Dynamics of Microcystis spp. and Their Toxigenicity as Assessed by qPCR in a Temperate Reservoir
por: Martins, António, et al.
Publicado: (2011)

Comparative transcriptomic analysis indicates genes associated with local and systemic resistance to Colletotrichum graminicola in maize
por: Miranda, Vívian de Jesus, et al.
Publicado: (2017)

Diversity of Colletotrichum Species Associated with Olive Anthracnose Worldwide
por: Moral, Juan, et al.
Publicado: (2021)

Monitoring Colletotrichum Colonization and Reproduction in Different Rubber Tree Clones
por: Firmino, Ana Carolina, et al.
Publicado: (2022)

Correspondence between symptom development of Colletotrichum graminicola and fungal biomass, quantified by a newly developed qPCR assay, depends on the maize variety
por: Weihmann, Fabian, et al.
Publicado: (2016)

Costs of incident non-hip osteoporosis-related fractures in postmenopausal women from a payer perspective
por: Barcelos, Anabela, et al.
Publicado: (2023)

RNA-Seq is not required to determine stable reference genes for qPCR normalization
por: Sampathkumar, Nirmal Kumar, et al.
Publicado: (2022)

Cohort profile: Health trajectories of Immigrant Children (CRIAS)–a prospective cohort study in the metropolitan area of Lisbon, Portugal
por: Muggli, Zélia, et al.
Publicado: (2022)

Effectiveness analysis of an internet-based intervention for overweight adolescents: next steps for researchers and clinicians
por: Fonseca, Helena, et al.
Publicado: (2016)

RNA‐seq‐based selection of reference genes for RT‐qPCR analysis of pitaya
por: Nong, Quandong, et al.
Publicado: (2019)

Colletotrichum: species, ecology and interactions
por: Damm, Ulrike, et al.
Publicado: (2010)

The Colletotrichum boninense species complex
por: Damm, U., et al.
Publicado: (2012)

The Colletotrichum acutatum species complex
por: Damm, U., et al.
Publicado: (2012)

The Colletotrichum gloeosporioides species complex
por: Weir, B.S., et al.
Publicado: (2012)

The Colletotrichum gigasporum species complex
por: Liu, F., et al.
Publicado: (2014)

Pest categorisation of Colletotrichum gossypii
por: Jeger, Michael, et al.
Publicado: (2018)

Pest categorisation of Colletotrichum plurivorum
por: Bragard, Claude, et al.
Publicado: (2021)

Pest categorisation of Colletotrichum fructicola
por: Bragard, Claude, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_uq0ql80d3h3qhgt776qiqvgbh0