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Studying Sub-Dendrograms of Resting-State Functional Networks with Voxel-Wise Hierarchical Clustering
Hierarchical clustering is a useful data-driven approach to classify complex data and has been used to analyze resting-state functional magnetic resonance imaging (fMRI) data and derive functional networks of the human brain at very large scale, such as the entire visual or sensory-motor cortex. In...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4781834/ https://www.ncbi.nlm.nih.gov/pubmed/27014015 http://dx.doi.org/10.3389/fnhum.2016.00075 |
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author | Wang, Yanlu Msghina, Mussie Li, Tie-Qiang |
author_facet | Wang, Yanlu Msghina, Mussie Li, Tie-Qiang |
author_sort | Wang, Yanlu |
collection | PubMed |
description | Hierarchical clustering is a useful data-driven approach to classify complex data and has been used to analyze resting-state functional magnetic resonance imaging (fMRI) data and derive functional networks of the human brain at very large scale, such as the entire visual or sensory-motor cortex. In this study, we developed a voxel-wise, whole-brain hierarchical clustering framework to perform multi-stage analysis of group-averaged resting-state fMRI data in different levels of detail. With the framework we analyzed particularly the somatosensory motor and visual systems in fine details and constructed the corresponding sub-dendrograms, which corroborate consistently with the known modular organizations from previous clinical and experimental studies. The framework provides a useful tool for data-driven analysis of resting-state fMRI data to gain insight into the hierarchical organization and degree of functional modulation among the sub-units. |
format | Online Article Text |
id | pubmed-4781834 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-47818342016-03-24 Studying Sub-Dendrograms of Resting-State Functional Networks with Voxel-Wise Hierarchical Clustering Wang, Yanlu Msghina, Mussie Li, Tie-Qiang Front Hum Neurosci Neuroscience Hierarchical clustering is a useful data-driven approach to classify complex data and has been used to analyze resting-state functional magnetic resonance imaging (fMRI) data and derive functional networks of the human brain at very large scale, such as the entire visual or sensory-motor cortex. In this study, we developed a voxel-wise, whole-brain hierarchical clustering framework to perform multi-stage analysis of group-averaged resting-state fMRI data in different levels of detail. With the framework we analyzed particularly the somatosensory motor and visual systems in fine details and constructed the corresponding sub-dendrograms, which corroborate consistently with the known modular organizations from previous clinical and experimental studies. The framework provides a useful tool for data-driven analysis of resting-state fMRI data to gain insight into the hierarchical organization and degree of functional modulation among the sub-units. Frontiers Media S.A. 2016-03-08 /pmc/articles/PMC4781834/ /pubmed/27014015 http://dx.doi.org/10.3389/fnhum.2016.00075 Text en Copyright © 2016 Wang, Msghina and Li. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Wang, Yanlu Msghina, Mussie Li, Tie-Qiang Studying Sub-Dendrograms of Resting-State Functional Networks with Voxel-Wise Hierarchical Clustering |
title | Studying Sub-Dendrograms of Resting-State Functional Networks with Voxel-Wise Hierarchical Clustering |
title_full | Studying Sub-Dendrograms of Resting-State Functional Networks with Voxel-Wise Hierarchical Clustering |
title_fullStr | Studying Sub-Dendrograms of Resting-State Functional Networks with Voxel-Wise Hierarchical Clustering |
title_full_unstemmed | Studying Sub-Dendrograms of Resting-State Functional Networks with Voxel-Wise Hierarchical Clustering |
title_short | Studying Sub-Dendrograms of Resting-State Functional Networks with Voxel-Wise Hierarchical Clustering |
title_sort | studying sub-dendrograms of resting-state functional networks with voxel-wise hierarchical clustering |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4781834/ https://www.ncbi.nlm.nih.gov/pubmed/27014015 http://dx.doi.org/10.3389/fnhum.2016.00075 |
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