Cargando…
The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association
In living systems proteins are typically found in crowded environments where their effective interactions strongly depend on the surrounding medium. Yet, their association and dissociation needs to be robustly controlled in order to enable biological function. Uncontrolled protein aggregation often...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4783108/ https://www.ncbi.nlm.nih.gov/pubmed/26954357 http://dx.doi.org/10.1371/journal.pone.0151159 |
_version_ | 1782420074522476544 |
---|---|
author | Wei, Jiachen Dobnikar, Jure Curk, Tine Song, Fan |
author_facet | Wei, Jiachen Dobnikar, Jure Curk, Tine Song, Fan |
author_sort | Wei, Jiachen |
collection | PubMed |
description | In living systems proteins are typically found in crowded environments where their effective interactions strongly depend on the surrounding medium. Yet, their association and dissociation needs to be robustly controlled in order to enable biological function. Uncontrolled protein aggregation often causes disease. For instance, cataract is caused by the clustering of lens proteins, i.e., crystallins, resulting in enhanced light scattering and impaired vision or blindness. To investigate the molecular origins of cataract formation and to design efficient treatments, a better understanding of crystallin association in macromolecular crowded environment is needed. Here we present a theoretical study of simple coarse grained colloidal models to characterize the general features of how the association equilibrium of proteins depends on the magnitude of intermolecular attraction. By comparing the analytic results to the available experimental data on the osmotic pressure in crystallin solutions, we identify the effective parameters regimes applicable to crystallins. Moreover, the combination of two models allows us to predict that the number of binding sites on crystallin is small, i.e. one to three per protein, which is different from previous estimates. We further observe that the crowding factor is sensitive to the size asymmetry between the reactants and crowding agents, the shape of the protein clusters, and to small variations of intermolecular attraction. Our work may provide general guidelines on how to steer the protein interactions in order to control their association. |
format | Online Article Text |
id | pubmed-4783108 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-47831082016-03-23 The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association Wei, Jiachen Dobnikar, Jure Curk, Tine Song, Fan PLoS One Research Article In living systems proteins are typically found in crowded environments where their effective interactions strongly depend on the surrounding medium. Yet, their association and dissociation needs to be robustly controlled in order to enable biological function. Uncontrolled protein aggregation often causes disease. For instance, cataract is caused by the clustering of lens proteins, i.e., crystallins, resulting in enhanced light scattering and impaired vision or blindness. To investigate the molecular origins of cataract formation and to design efficient treatments, a better understanding of crystallin association in macromolecular crowded environment is needed. Here we present a theoretical study of simple coarse grained colloidal models to characterize the general features of how the association equilibrium of proteins depends on the magnitude of intermolecular attraction. By comparing the analytic results to the available experimental data on the osmotic pressure in crystallin solutions, we identify the effective parameters regimes applicable to crystallins. Moreover, the combination of two models allows us to predict that the number of binding sites on crystallin is small, i.e. one to three per protein, which is different from previous estimates. We further observe that the crowding factor is sensitive to the size asymmetry between the reactants and crowding agents, the shape of the protein clusters, and to small variations of intermolecular attraction. Our work may provide general guidelines on how to steer the protein interactions in order to control their association. Public Library of Science 2016-03-08 /pmc/articles/PMC4783108/ /pubmed/26954357 http://dx.doi.org/10.1371/journal.pone.0151159 Text en © 2016 Wei et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Wei, Jiachen Dobnikar, Jure Curk, Tine Song, Fan The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association |
title | The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association |
title_full | The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association |
title_fullStr | The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association |
title_full_unstemmed | The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association |
title_short | The Effect of Attractive Interactions and Macromolecular Crowding on Crystallins Association |
title_sort | effect of attractive interactions and macromolecular crowding on crystallins association |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4783108/ https://www.ncbi.nlm.nih.gov/pubmed/26954357 http://dx.doi.org/10.1371/journal.pone.0151159 |
work_keys_str_mv | AT weijiachen theeffectofattractiveinteractionsandmacromolecularcrowdingoncrystallinsassociation AT dobnikarjure theeffectofattractiveinteractionsandmacromolecularcrowdingoncrystallinsassociation AT curktine theeffectofattractiveinteractionsandmacromolecularcrowdingoncrystallinsassociation AT songfan theeffectofattractiveinteractionsandmacromolecularcrowdingoncrystallinsassociation AT weijiachen effectofattractiveinteractionsandmacromolecularcrowdingoncrystallinsassociation AT dobnikarjure effectofattractiveinteractionsandmacromolecularcrowdingoncrystallinsassociation AT curktine effectofattractiveinteractionsandmacromolecularcrowdingoncrystallinsassociation AT songfan effectofattractiveinteractionsandmacromolecularcrowdingoncrystallinsassociation |