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Data in support of association study of the brain-derived neurotrophic factor gene SNPs and completed suicide in the Slovenian sample
This data article provides the data generated from additional analyses of a genetic association study, where 7 single nucleotide polymorphisms (SNPs) near/within the brain-derived neurotrophic factor (BDNF) gene were investigated for an association with completed suicide in Slavic population (Ropret...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4783519/ https://www.ncbi.nlm.nih.gov/pubmed/26966717 http://dx.doi.org/10.1016/j.dib.2015.07.015 |
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author | Ropret, Sandra Zupanc, Tomaž Komel, Radovan Videtič Paska, Alja |
author_facet | Ropret, Sandra Zupanc, Tomaž Komel, Radovan Videtič Paska, Alja |
author_sort | Ropret, Sandra |
collection | PubMed |
description | This data article provides the data generated from additional analyses of a genetic association study, where 7 single nucleotide polymorphisms (SNPs) near/within the brain-derived neurotrophic factor (BDNF) gene were investigated for an association with completed suicide in Slavic population (Ropret et al., 2015) [1]. One SNP was excluded from the present analyses due to insufficient genotyping rate (rs1491850) and the remaining 6 SNPs (rs7124442, rs10767664, rs962369, rs12273363, rs908867, rs1491851) were analyzed to gain deeper insight into the possible role of these SNPs in the studied phenotype. We present data on logistic regression analyses of: (a) genotypes under four inheritance models, and (b) haplotypes using 2-, 3- and 4-adjacent SNPs sliding window procedure. In both analyses adjustments for potential confounders (age, gender and alcohol dependence syndrome status) were executed. Data may serve as a reference for comparison of the populations with either low or very high suicide rates. The raw genotyping data that could be used in case meta-analyses should be performed may be provided upon request. |
format | Online Article Text |
id | pubmed-4783519 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-47835192016-03-10 Data in support of association study of the brain-derived neurotrophic factor gene SNPs and completed suicide in the Slovenian sample Ropret, Sandra Zupanc, Tomaž Komel, Radovan Videtič Paska, Alja Data Brief Data Article This data article provides the data generated from additional analyses of a genetic association study, where 7 single nucleotide polymorphisms (SNPs) near/within the brain-derived neurotrophic factor (BDNF) gene were investigated for an association with completed suicide in Slavic population (Ropret et al., 2015) [1]. One SNP was excluded from the present analyses due to insufficient genotyping rate (rs1491850) and the remaining 6 SNPs (rs7124442, rs10767664, rs962369, rs12273363, rs908867, rs1491851) were analyzed to gain deeper insight into the possible role of these SNPs in the studied phenotype. We present data on logistic regression analyses of: (a) genotypes under four inheritance models, and (b) haplotypes using 2-, 3- and 4-adjacent SNPs sliding window procedure. In both analyses adjustments for potential confounders (age, gender and alcohol dependence syndrome status) were executed. Data may serve as a reference for comparison of the populations with either low or very high suicide rates. The raw genotyping data that could be used in case meta-analyses should be performed may be provided upon request. Elsevier 2015-07-22 /pmc/articles/PMC4783519/ /pubmed/26966717 http://dx.doi.org/10.1016/j.dib.2015.07.015 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Ropret, Sandra Zupanc, Tomaž Komel, Radovan Videtič Paska, Alja Data in support of association study of the brain-derived neurotrophic factor gene SNPs and completed suicide in the Slovenian sample |
title | Data in support of association study of the brain-derived neurotrophic factor gene SNPs and completed suicide in the Slovenian sample |
title_full | Data in support of association study of the brain-derived neurotrophic factor gene SNPs and completed suicide in the Slovenian sample |
title_fullStr | Data in support of association study of the brain-derived neurotrophic factor gene SNPs and completed suicide in the Slovenian sample |
title_full_unstemmed | Data in support of association study of the brain-derived neurotrophic factor gene SNPs and completed suicide in the Slovenian sample |
title_short | Data in support of association study of the brain-derived neurotrophic factor gene SNPs and completed suicide in the Slovenian sample |
title_sort | data in support of association study of the brain-derived neurotrophic factor gene snps and completed suicide in the slovenian sample |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4783519/ https://www.ncbi.nlm.nih.gov/pubmed/26966717 http://dx.doi.org/10.1016/j.dib.2015.07.015 |
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