Cargando…

α/β coiled coils

Coiled coils are the best-understood protein fold, as their backbone structure can uniquely be described by parametric equations. This level of understanding has allowed their manipulation in unprecedented detail. They do not seem a likely source of surprises, yet we describe here the unexpected for...

Descripción completa

Detalles Bibliográficos
Autores principales: Hartmann, Marcus D, Mendler, Claudia T, Bassler, Jens, Karamichali, Ioanna, Ridderbusch, Oswin, Lupas, Andrei N, Hernandez Alvarez, Birte
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4786415/
https://www.ncbi.nlm.nih.gov/pubmed/26771248
http://dx.doi.org/10.7554/eLife.11861
_version_ 1782420547738533888
author Hartmann, Marcus D
Mendler, Claudia T
Bassler, Jens
Karamichali, Ioanna
Ridderbusch, Oswin
Lupas, Andrei N
Hernandez Alvarez, Birte
author_facet Hartmann, Marcus D
Mendler, Claudia T
Bassler, Jens
Karamichali, Ioanna
Ridderbusch, Oswin
Lupas, Andrei N
Hernandez Alvarez, Birte
author_sort Hartmann, Marcus D
collection PubMed
description Coiled coils are the best-understood protein fold, as their backbone structure can uniquely be described by parametric equations. This level of understanding has allowed their manipulation in unprecedented detail. They do not seem a likely source of surprises, yet we describe here the unexpected formation of a new type of fiber by the simple insertion of two or six residues into the underlying heptad repeat of a parallel, trimeric coiled coil. These insertions strain the supercoil to the breaking point, causing the local formation of short β-strands, which move the path of the chain by 120° around the trimer axis. The result is an α/β coiled coil, which retains only one backbone hydrogen bond per repeat unit from the parent coiled coil. Our results show that a substantially novel backbone structure is possible within the allowed regions of the Ramachandran space with only minor mutations to a known fold. DOI: http://dx.doi.org/10.7554/eLife.11861.001
format Online
Article
Text
id pubmed-4786415
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher eLife Sciences Publications, Ltd
record_format MEDLINE/PubMed
spelling pubmed-47864152016-03-17 α/β coiled coils Hartmann, Marcus D Mendler, Claudia T Bassler, Jens Karamichali, Ioanna Ridderbusch, Oswin Lupas, Andrei N Hernandez Alvarez, Birte eLife Biophysics and Structural Biology Coiled coils are the best-understood protein fold, as their backbone structure can uniquely be described by parametric equations. This level of understanding has allowed their manipulation in unprecedented detail. They do not seem a likely source of surprises, yet we describe here the unexpected formation of a new type of fiber by the simple insertion of two or six residues into the underlying heptad repeat of a parallel, trimeric coiled coil. These insertions strain the supercoil to the breaking point, causing the local formation of short β-strands, which move the path of the chain by 120° around the trimer axis. The result is an α/β coiled coil, which retains only one backbone hydrogen bond per repeat unit from the parent coiled coil. Our results show that a substantially novel backbone structure is possible within the allowed regions of the Ramachandran space with only minor mutations to a known fold. DOI: http://dx.doi.org/10.7554/eLife.11861.001 eLife Sciences Publications, Ltd 2016-01-15 /pmc/articles/PMC4786415/ /pubmed/26771248 http://dx.doi.org/10.7554/eLife.11861 Text en © 2016, Hartmann et al http://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Biophysics and Structural Biology
Hartmann, Marcus D
Mendler, Claudia T
Bassler, Jens
Karamichali, Ioanna
Ridderbusch, Oswin
Lupas, Andrei N
Hernandez Alvarez, Birte
α/β coiled coils
title α/β coiled coils
title_full α/β coiled coils
title_fullStr α/β coiled coils
title_full_unstemmed α/β coiled coils
title_short α/β coiled coils
title_sort α/β coiled coils
topic Biophysics and Structural Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4786415/
https://www.ncbi.nlm.nih.gov/pubmed/26771248
http://dx.doi.org/10.7554/eLife.11861
work_keys_str_mv AT hartmannmarcusd abcoiledcoils
AT mendlerclaudiat abcoiledcoils
AT basslerjens abcoiledcoils
AT karamichaliioanna abcoiledcoils
AT ridderbuschoswin abcoiledcoils
AT lupasandrein abcoiledcoils
AT hernandezalvarezbirte abcoiledcoils