Cargando…
Draft Genome Sequences of Rhodosporidium toruloides Strains ATCC 10788 and ATCC 10657 with Compatible Mating Types
Rhodosporidium toruloides ATCC 10788 (haploid, A1 mating type) and ATCC 10657 (haploid, A2 mating type) were derived from the same diploid parent strain Rhodotorula glutinis ATCC 90781 and are important strains for metabolic engineering. Draft genome sequences of both strains are reported here. The...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Microbiology
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4786659/ https://www.ncbi.nlm.nih.gov/pubmed/26966203 http://dx.doi.org/10.1128/genomeA.00098-16 |
_version_ | 1782420583220248576 |
---|---|
author | Hu, Jie Ji, Lianghui |
author_facet | Hu, Jie Ji, Lianghui |
author_sort | Hu, Jie |
collection | PubMed |
description | Rhodosporidium toruloides ATCC 10788 (haploid, A1 mating type) and ATCC 10657 (haploid, A2 mating type) were derived from the same diploid parent strain Rhodotorula glutinis ATCC 90781 and are important strains for metabolic engineering. Draft genome sequences of both strains are reported here. The current assembly of strain ATCC 10788 comprises 61 scaffolds with a total size of 20.75 Mbp and a GC content of 62.01%, while that of strain ATCC 10657 comprises 137 scaffolds with a total size of 21.49 Mbp and a GC content of 61.81%. Genome annotation predicts 7,730 and 7,800 protein encoding genes for strain ATCC 10788 and strain ATCC 10657, respectively. |
format | Online Article Text |
id | pubmed-4786659 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-47866592016-03-22 Draft Genome Sequences of Rhodosporidium toruloides Strains ATCC 10788 and ATCC 10657 with Compatible Mating Types Hu, Jie Ji, Lianghui Genome Announc Eukaryotes Rhodosporidium toruloides ATCC 10788 (haploid, A1 mating type) and ATCC 10657 (haploid, A2 mating type) were derived from the same diploid parent strain Rhodotorula glutinis ATCC 90781 and are important strains for metabolic engineering. Draft genome sequences of both strains are reported here. The current assembly of strain ATCC 10788 comprises 61 scaffolds with a total size of 20.75 Mbp and a GC content of 62.01%, while that of strain ATCC 10657 comprises 137 scaffolds with a total size of 21.49 Mbp and a GC content of 61.81%. Genome annotation predicts 7,730 and 7,800 protein encoding genes for strain ATCC 10788 and strain ATCC 10657, respectively. American Society for Microbiology 2016-03-10 /pmc/articles/PMC4786659/ /pubmed/26966203 http://dx.doi.org/10.1128/genomeA.00098-16 Text en Copyright © 2016 Hu and Ji. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Eukaryotes Hu, Jie Ji, Lianghui Draft Genome Sequences of Rhodosporidium toruloides Strains ATCC 10788 and ATCC 10657 with Compatible Mating Types |
title | Draft Genome Sequences of Rhodosporidium toruloides Strains ATCC 10788 and ATCC 10657 with Compatible Mating Types |
title_full | Draft Genome Sequences of Rhodosporidium toruloides Strains ATCC 10788 and ATCC 10657 with Compatible Mating Types |
title_fullStr | Draft Genome Sequences of Rhodosporidium toruloides Strains ATCC 10788 and ATCC 10657 with Compatible Mating Types |
title_full_unstemmed | Draft Genome Sequences of Rhodosporidium toruloides Strains ATCC 10788 and ATCC 10657 with Compatible Mating Types |
title_short | Draft Genome Sequences of Rhodosporidium toruloides Strains ATCC 10788 and ATCC 10657 with Compatible Mating Types |
title_sort | draft genome sequences of rhodosporidium toruloides strains atcc 10788 and atcc 10657 with compatible mating types |
topic | Eukaryotes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4786659/ https://www.ncbi.nlm.nih.gov/pubmed/26966203 http://dx.doi.org/10.1128/genomeA.00098-16 |
work_keys_str_mv | AT hujie draftgenomesequencesofrhodosporidiumtoruloidesstrainsatcc10788andatcc10657withcompatiblematingtypes AT jilianghui draftgenomesequencesofrhodosporidiumtoruloidesstrainsatcc10788andatcc10657withcompatiblematingtypes |