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Count ratio model reveals bias affecting NGS fold changes

Various biases affect high-throughput sequencing read counts. Contrary to the general assumption, we show that bias does not always cancel out when fold changes are computed and that bias affects more than 20% of genes that are called differentially regulated in RNA-seq experiments with drastic effe...

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Detalles Bibliográficos
Autores principales: Erhard, Florian, Zimmer, Ralf
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4787746/
https://www.ncbi.nlm.nih.gov/pubmed/26160885
http://dx.doi.org/10.1093/nar/gkv696

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