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Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil

The impact of arsenite (As[III]) on the bacterial community structure and diversity in soil was determined by incubating soil slurries with 50, 500, and 5,000 μM As(III). As(III) was oxidized to arsenate (As[V]), and the microbial contribution to As(III) oxidation was 70–100%. PCR-denaturing gradien...

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Autores principales: Dong, Dian-Tao, Yamamura, Shigeki, Amachi, Seigo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2016
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4791115/
https://www.ncbi.nlm.nih.gov/pubmed/26903368
http://dx.doi.org/10.1264/jsme2.ME15093
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author Dong, Dian-Tao
Yamamura, Shigeki
Amachi, Seigo
author_facet Dong, Dian-Tao
Yamamura, Shigeki
Amachi, Seigo
author_sort Dong, Dian-Tao
collection PubMed
description The impact of arsenite (As[III]) on the bacterial community structure and diversity in soil was determined by incubating soil slurries with 50, 500, and 5,000 μM As(III). As(III) was oxidized to arsenate (As[V]), and the microbial contribution to As(III) oxidation was 70–100%. PCR-denaturing gradient gel electrophoresis revealed that soil bacterial diversity decreased in the presence of As(III). Bacteria closely related to the family Bacillaceae were predominant in slurry spiked with 5,000 μM As(III). The population size of culturable As(III)-resistant bacteria was 37-fold higher in this slurry than in unspiked slurry (p < 0.01), indicating that high levels of As(III) stimulate the emergence of As(III)-resistant bacteria. As(III)-resistant bacteria isolated from slurry spiked with 5,000 μM As(III) were mainly affiliated with the genus Bacillus; however, no strains showed As(III)-oxidizing capacity. An As(III)-oxidizing bacterial community analysis based on As(III) oxidase gene (aioA) sequences demonstrated that diversity was the lowest in slurry spiked with 5,000 μM As(III). The deduced AioA sequences affiliated with Alphaproteobacteria accounted for 91–93% of all sequences in this slurry, among which those closely related to Bosea spp. were predominant (48–86%). These results suggest that exposure to high levels of As(III) has a significant impact on the composition and diversity of the soil bacterial community, including the As(III)-oxidizing bacterial community. Certain As(III)-oxidizing bacteria with strong As(III) resistance may be enriched under high As(III) levels, while more sensitive As(III) oxidizers are eliminated under these conditions.
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spelling pubmed-47911152016-03-21 Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil Dong, Dian-Tao Yamamura, Shigeki Amachi, Seigo Microbes Environ Articles The impact of arsenite (As[III]) on the bacterial community structure and diversity in soil was determined by incubating soil slurries with 50, 500, and 5,000 μM As(III). As(III) was oxidized to arsenate (As[V]), and the microbial contribution to As(III) oxidation was 70–100%. PCR-denaturing gradient gel electrophoresis revealed that soil bacterial diversity decreased in the presence of As(III). Bacteria closely related to the family Bacillaceae were predominant in slurry spiked with 5,000 μM As(III). The population size of culturable As(III)-resistant bacteria was 37-fold higher in this slurry than in unspiked slurry (p < 0.01), indicating that high levels of As(III) stimulate the emergence of As(III)-resistant bacteria. As(III)-resistant bacteria isolated from slurry spiked with 5,000 μM As(III) were mainly affiliated with the genus Bacillus; however, no strains showed As(III)-oxidizing capacity. An As(III)-oxidizing bacterial community analysis based on As(III) oxidase gene (aioA) sequences demonstrated that diversity was the lowest in slurry spiked with 5,000 μM As(III). The deduced AioA sequences affiliated with Alphaproteobacteria accounted for 91–93% of all sequences in this slurry, among which those closely related to Bosea spp. were predominant (48–86%). These results suggest that exposure to high levels of As(III) has a significant impact on the composition and diversity of the soil bacterial community, including the As(III)-oxidizing bacterial community. Certain As(III)-oxidizing bacteria with strong As(III) resistance may be enriched under high As(III) levels, while more sensitive As(III) oxidizers are eliminated under these conditions. the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2016-03 2016-02-20 /pmc/articles/PMC4791115/ /pubmed/26903368 http://dx.doi.org/10.1264/jsme2.ME15093 Text en Copyright © 2016 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Dong, Dian-Tao
Yamamura, Shigeki
Amachi, Seigo
Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil
title Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil
title_full Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil
title_fullStr Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil
title_full_unstemmed Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil
title_short Impact of Arsenite on the Bacterial Community Structure and Diversity in Soil
title_sort impact of arsenite on the bacterial community structure and diversity in soil
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4791115/
https://www.ncbi.nlm.nih.gov/pubmed/26903368
http://dx.doi.org/10.1264/jsme2.ME15093
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