Cargando…

Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level

Remineralization and transformation of dissolved organic matter (DOM) by marine microbes shape the DOM composition and thus, have large impact on global carbon and nutrient cycling. However, information on bacterioplankton-DOM interactions on a molecular level is limited. We examined the variation o...

Descripción completa

Detalles Bibliográficos
Autores principales: Lucas, Judith, Koester, Irina, Wichels, Antje, Niggemann, Jutta, Dittmar, Thorsten, Callies, Ulrich, Wiltshire, Karen H., Gerdts, Gunnar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4791370/
https://www.ncbi.nlm.nih.gov/pubmed/27014241
http://dx.doi.org/10.3389/fmicb.2016.00321
_version_ 1782421072924114944
author Lucas, Judith
Koester, Irina
Wichels, Antje
Niggemann, Jutta
Dittmar, Thorsten
Callies, Ulrich
Wiltshire, Karen H.
Gerdts, Gunnar
author_facet Lucas, Judith
Koester, Irina
Wichels, Antje
Niggemann, Jutta
Dittmar, Thorsten
Callies, Ulrich
Wiltshire, Karen H.
Gerdts, Gunnar
author_sort Lucas, Judith
collection PubMed
description Remineralization and transformation of dissolved organic matter (DOM) by marine microbes shape the DOM composition and thus, have large impact on global carbon and nutrient cycling. However, information on bacterioplankton-DOM interactions on a molecular level is limited. We examined the variation of bacterial community composition (BCC) at Helgoland Roads (North Sea) in relation to variation of molecular DOM composition and various environmental parameters on short-time scales. Surface water samples were taken daily over a period of 20 days. Bacterial community and molecular DOM composition were assessed via 16S rRNA gene tag sequencing and ultrahigh resolution Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR-MS), respectively. Environmental conditions were driven by a coastal water influx during the first half of the sampling period and the onset of a summer phytoplankton bloom toward the end of the sampling period. These phenomena led to a distinct grouping of bacterial communities and DOM composition which was particularly influenced by total dissolved nitrogen (TDN) concentration, temperature, and salinity, as revealed by distance-based linear regression analyses. Bacterioplankton-DOM interaction was demonstrated in strong correlations between specific bacterial taxa and particular DOM molecules, thus, suggesting potential specialization on particular substrates. We propose that a combination of high resolution techniques, as used in this study, may provide substantial information on substrate generalists and specialists and thus, contribute to prediction of BCC variation.
format Online
Article
Text
id pubmed-4791370
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-47913702016-03-24 Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level Lucas, Judith Koester, Irina Wichels, Antje Niggemann, Jutta Dittmar, Thorsten Callies, Ulrich Wiltshire, Karen H. Gerdts, Gunnar Front Microbiol Microbiology Remineralization and transformation of dissolved organic matter (DOM) by marine microbes shape the DOM composition and thus, have large impact on global carbon and nutrient cycling. However, information on bacterioplankton-DOM interactions on a molecular level is limited. We examined the variation of bacterial community composition (BCC) at Helgoland Roads (North Sea) in relation to variation of molecular DOM composition and various environmental parameters on short-time scales. Surface water samples were taken daily over a period of 20 days. Bacterial community and molecular DOM composition were assessed via 16S rRNA gene tag sequencing and ultrahigh resolution Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR-MS), respectively. Environmental conditions were driven by a coastal water influx during the first half of the sampling period and the onset of a summer phytoplankton bloom toward the end of the sampling period. These phenomena led to a distinct grouping of bacterial communities and DOM composition which was particularly influenced by total dissolved nitrogen (TDN) concentration, temperature, and salinity, as revealed by distance-based linear regression analyses. Bacterioplankton-DOM interaction was demonstrated in strong correlations between specific bacterial taxa and particular DOM molecules, thus, suggesting potential specialization on particular substrates. We propose that a combination of high resolution techniques, as used in this study, may provide substantial information on substrate generalists and specialists and thus, contribute to prediction of BCC variation. Frontiers Media S.A. 2016-03-15 /pmc/articles/PMC4791370/ /pubmed/27014241 http://dx.doi.org/10.3389/fmicb.2016.00321 Text en Copyright © 2016 Lucas, Koester, Wichels, Niggemann, Dittmar, Callies, Wiltshire and Gerdts. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Lucas, Judith
Koester, Irina
Wichels, Antje
Niggemann, Jutta
Dittmar, Thorsten
Callies, Ulrich
Wiltshire, Karen H.
Gerdts, Gunnar
Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level
title Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level
title_full Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level
title_fullStr Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level
title_full_unstemmed Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level
title_short Short-Term Dynamics of North Sea Bacterioplankton-Dissolved Organic Matter Coherence on Molecular Level
title_sort short-term dynamics of north sea bacterioplankton-dissolved organic matter coherence on molecular level
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4791370/
https://www.ncbi.nlm.nih.gov/pubmed/27014241
http://dx.doi.org/10.3389/fmicb.2016.00321
work_keys_str_mv AT lucasjudith shorttermdynamicsofnorthseabacterioplanktondissolvedorganicmattercoherenceonmolecularlevel
AT koesteririna shorttermdynamicsofnorthseabacterioplanktondissolvedorganicmattercoherenceonmolecularlevel
AT wichelsantje shorttermdynamicsofnorthseabacterioplanktondissolvedorganicmattercoherenceonmolecularlevel
AT niggemannjutta shorttermdynamicsofnorthseabacterioplanktondissolvedorganicmattercoherenceonmolecularlevel
AT dittmarthorsten shorttermdynamicsofnorthseabacterioplanktondissolvedorganicmattercoherenceonmolecularlevel
AT calliesulrich shorttermdynamicsofnorthseabacterioplanktondissolvedorganicmattercoherenceonmolecularlevel
AT wiltshirekarenh shorttermdynamicsofnorthseabacterioplanktondissolvedorganicmattercoherenceonmolecularlevel
AT gerdtsgunnar shorttermdynamicsofnorthseabacterioplanktondissolvedorganicmattercoherenceonmolecularlevel