Cargando…

Single-cell transcriptome analysis of endometrial tissue

STUDY QUESTION: How can we study the full transcriptome of endometrial stromal and epithelial cells at the single-cell level? SUMMARY ANSWER: By compiling and developing novel analytical tools for biopsy, tissue cryopreservation and disaggregation, single-cell sorting, library preparation, RNA seque...

Descripción completa

Detalles Bibliográficos
Autores principales:	Krjutškov, K., Katayama, S., Saare, M., Vera-Rodriguez, M., Lubenets, D., Samuel, K., Laisk-Podar, T., Teder, H., Einarsdottir, E., Salumets, A., Kere, J.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2016
Materias:	Original Articles
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4791917/ https://www.ncbi.nlm.nih.gov/pubmed/26874359 http://dx.doi.org/10.1093/humrep/dew008

Ejemplares similares

Human endometrial cell-type-specific RNA sequencing provides new insights into the embryo–endometrium interplay
por: Koel, Mariann, et al.
Publicado: (2022)

Meta-signature of human endometrial receptivity: a meta-analysis and validation study of transcriptomic biomarkers
por: Altmäe, Signe, et al.
Publicado: (2017)

TAC-seq: targeted DNA and RNA sequencing for precise biomarker molecule counting
por: Teder, Hindrek, et al.
Publicado: (2018)

Targeted gene expression profiling for accurate endometrial receptivity testing
por: Meltsov, Alvin, et al.
Publicado: (2023)

Guide for library design and bias correction for large-scale transcriptome studies using highly multiplexed RNAseq methods
por: Katayama, Shintaro, et al.
Publicado: (2019)

A preliminary transcriptome analysis suggests a transitory effect of vitamin D on mitochondrial function in obese young Finnish subjects
por: Einarsdottir, Elisabet, et al.
Publicado: (2019)

Globin mRNA reduction for whole-blood transcriptome sequencing
por: Krjutškov, Kaarel, et al.
Publicado: (2016)

Whole exome sequencing of benign pulmonary metastasizing leiomyoma reveals mutation in the BMP8B gene
por: Sõritsa, Deniss, et al.
Publicado: (2018)

High-Throughput Sequencing Approach Uncovers the miRNome of Peritoneal Endometriotic Lesions and Adjacent Healthy Tissues
por: Saare, Merli, et al.
Publicado: (2014)

Generation of RNA sequencing libraries for transcriptome analysis of globin-rich tissues of the domestic dog
por: Ezer, Sini, et al.
Publicado: (2021)

Computational framework for targeted high-coverage sequencing based NIPT
por: Teder, Hindrek, et al.
Publicado: (2019)

Differences in microbial profile of endometrial fluid and tissue samples in women with in vitro fertilization failure are driven by Lactobacillus abundance
por: Lüll, Kreete, et al.
Publicado: (2022)

Gene-Expression Profiling Suggests Impaired Signaling via the Interferon Pathway in Cstb(-/-) Microglia
por: Körber, Inken, et al.
Publicado: (2016)

Systematic evaluation of NIPT aneuploidy detection software tools with clinically validated NIPT samples
por: Paluoja, Priit, et al.
Publicado: (2021)

Pleomorphic Adenoma Gene 1 Is Needed For Timely Zygotic Genome Activation and Early Embryo Development
por: Madissoon, Elo, et al.
Publicado: (2019)

Endometrial receptivity in women of advanced age: an underrated factor in infertility
por: Pathare, Amruta D S, et al.
Publicado: (2023)

Mlh1 deficiency in normal mouse colon mucosa associates with chromosomally unstable colon cancer
por: Pussila, Marjaana, et al.
Publicado: (2018)

Coupling miR/isomiR and mRNA Expression Signatures Unveils New Molecular Layers of Endometrial Receptivity
por: Nikolova, Maria, et al.
Publicado: (2021)

Ketogenic diet attenuates hepatopathy in mouse model of respiratory chain complex III deficiency caused by a Bcs1l mutation
por: Purhonen, Janne, et al.
Publicado: (2017)

Variability of genome-wide DNA methylation and mRNA expression profiles in reproductive and endocrine disease related tissues
por: Rahmioglu, Nilufer, et al.
Publicado: (2017)

SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization
por: Katayama, Shintaro, et al.
Publicado: (2013)

Decidualized endometrial stromal cells present with altered androgen response in PCOS
por: Khatun, Masuma, et al.
Publicado: (2021)

The human long non-coding RNA gene RMRP has pleiotropic effects and regulates cell-cycle progression at G2
por: Vakkilainen, Svetlana, et al.
Publicado: (2019)

Tissue-specific mitochondrial heteroplasmy at position 16,093 within the same individual
por: Krjutškov, Kaarel, et al.
Publicado: (2013)

The mid-secretory endometrial transcriptomic landscape in endometriosis: a meta-analysis
por: Vargas, E, et al.
Publicado: (2022)

The influence of menstrual cycle and endometriosis on endometrial methylome
por: Saare, Merli, et al.
Publicado: (2016)

Dyslexia Candidate Gene and Ciliary Gene Expression Dynamics During Human Neuronal Differentiation
por: Bieder, Andrea, et al.
Publicado: (2020)

Corrigendum: Characterization and target genes of nine human PRD-like homeobox domain genes expressed exclusively in early embryos
por: Madissoon, Elo, et al.
Publicado: (2016)

Characterization and target genes of nine human PRD-like homeobox domain genes expressed exclusively in early embryos
por: Madissoon, Elo, et al.
Publicado: (2016)

Optimized single-cell RNA sequencing protocol to study early genome activation in mammalian preimplantation development
por: Boskovic, Nina, et al.
Publicado: (2023)

Circulating microRNA Profile throughout the Menstrual Cycle
por: Rekker, Kadri, et al.
Publicado: (2013)

The cervical transcriptome changes during the menstrual cycle but does not predict the window of implantation
por: Pathare, Amruta D. S., et al.
Publicado: (2023)

Prenatal diagnosis of a 46,XY karyotype female fetus with an SRY-associated gonadal dysgenesis, conceived through an intracytoplasmic sperm injection: a case report
por: Zhytnik, Lidiia, et al.
Publicado: (2022)

NIPTmer: rapid k-mer-based software package for detection of fetal aneuploidies
por: Sauk, Martin, et al.
Publicado: (2018)

MANF protects human pancreatic beta cells against stress-induced cell death
por: Hakonen, Elina, et al.
Publicado: (2018)

DNA methylation changes in endometrium and correlation with gene expression during the transition from pre-receptive to receptive phase
por: Kukushkina, Viktorija, et al.
Publicado: (2017)

Idiopathic scoliosis: a systematic review and meta-analysis of heritability
por: Cheng, Tian, et al.
Publicado: (2022)

Human pluripotent reprogramming with CRISPR activators
por: Weltner, Jere, et al.
Publicado: (2018)

Changes in the Transcriptome of the Human Endometrial Ishikawa Cancer Cell Line Induced by Estrogen, Progesterone, Tamoxifen, and Mifepristone (RU486) as Detected by RNA-Sequencing
por: Tamm-Rosenstein, Karin, et al.
Publicado: (2013)

Differentially-Expressed miRNAs in Ectopic Stromal Cells Contribute to Endometriosis Development: The Plausible Role of miR-139-5p and miR-375
por: Rekker, Kadri, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_pm6qjofvvo5ft0rb99e7cjlrsf