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Validation of Reference Genes for Quantitative Real-Time PCR in Bovine PBMCs Transformed and Non-transformed by Theileria annulata
Theileria annulata is a tick-borne intracellular protozoan parasite that causes tropical theileriosis, a fatal bovine lymphoproliferative disease. The parasite predominantly invades bovine B lymphocytes and macrophages and induces host cell transformation by a mechanism that is not fully comprehende...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Korean Society for Parasitology and Tropical Medicine
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4792322/ https://www.ncbi.nlm.nih.gov/pubmed/26951977 http://dx.doi.org/10.3347/kjp.2016.54.1.39 |
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author | Zhao, Hongxi Liu, Junlong Li, Youquan Yang, Congshan Zhao, Shuaiyang Liu, Juan Liu, Aihong Liu, Guangyuan Yin, Hong Guan, Guiquan Luo, Jianxun |
author_facet | Zhao, Hongxi Liu, Junlong Li, Youquan Yang, Congshan Zhao, Shuaiyang Liu, Juan Liu, Aihong Liu, Guangyuan Yin, Hong Guan, Guiquan Luo, Jianxun |
author_sort | Zhao, Hongxi |
collection | PubMed |
description | Theileria annulata is a tick-borne intracellular protozoan parasite that causes tropical theileriosis, a fatal bovine lymphoproliferative disease. The parasite predominantly invades bovine B lymphocytes and macrophages and induces host cell transformation by a mechanism that is not fully comprehended. Analysis of signaling pathways by quantitative real-time PCR (qPCR) could be a highly efficient means to understand this transformation mechanism. However, accurate analysis of qPCR data relies on selection of appropriate reference genes for normalization, yet few papers on T. annulata contain evidence of reference gene validation. We therefore used the geNorm and NormFinder programs to evaluate the stability of 5 candidate reference genes; 18S rRNA, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), ACTB (β-actin), PRKG1 (protein kinase cGMP-dependent, type I) and TATA box binding protein (TBP). The results showed that 18S rRNA was the reference gene most stably expressed in bovine PBMCs transformed and non-transformed with T. annulata, followed by GAPDH and TBP. While 18S rRNA and GAPDH were the best combination, these 2 genes were chosen as references to study signaling pathways involved in the transformation mechanism of T. annulata. |
format | Online Article Text |
id | pubmed-4792322 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | The Korean Society for Parasitology and Tropical Medicine |
record_format | MEDLINE/PubMed |
spelling | pubmed-47923222016-03-17 Validation of Reference Genes for Quantitative Real-Time PCR in Bovine PBMCs Transformed and Non-transformed by Theileria annulata Zhao, Hongxi Liu, Junlong Li, Youquan Yang, Congshan Zhao, Shuaiyang Liu, Juan Liu, Aihong Liu, Guangyuan Yin, Hong Guan, Guiquan Luo, Jianxun Korean J Parasitol Original Article Theileria annulata is a tick-borne intracellular protozoan parasite that causes tropical theileriosis, a fatal bovine lymphoproliferative disease. The parasite predominantly invades bovine B lymphocytes and macrophages and induces host cell transformation by a mechanism that is not fully comprehended. Analysis of signaling pathways by quantitative real-time PCR (qPCR) could be a highly efficient means to understand this transformation mechanism. However, accurate analysis of qPCR data relies on selection of appropriate reference genes for normalization, yet few papers on T. annulata contain evidence of reference gene validation. We therefore used the geNorm and NormFinder programs to evaluate the stability of 5 candidate reference genes; 18S rRNA, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), ACTB (β-actin), PRKG1 (protein kinase cGMP-dependent, type I) and TATA box binding protein (TBP). The results showed that 18S rRNA was the reference gene most stably expressed in bovine PBMCs transformed and non-transformed with T. annulata, followed by GAPDH and TBP. While 18S rRNA and GAPDH were the best combination, these 2 genes were chosen as references to study signaling pathways involved in the transformation mechanism of T. annulata. The Korean Society for Parasitology and Tropical Medicine 2016-02 2016-02-26 /pmc/articles/PMC4792322/ /pubmed/26951977 http://dx.doi.org/10.3347/kjp.2016.54.1.39 Text en © 2016, Korean Society for Parasitology and Tropical Medicine This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Zhao, Hongxi Liu, Junlong Li, Youquan Yang, Congshan Zhao, Shuaiyang Liu, Juan Liu, Aihong Liu, Guangyuan Yin, Hong Guan, Guiquan Luo, Jianxun Validation of Reference Genes for Quantitative Real-Time PCR in Bovine PBMCs Transformed and Non-transformed by Theileria annulata |
title | Validation of Reference Genes for Quantitative Real-Time PCR in Bovine PBMCs Transformed and Non-transformed by Theileria annulata |
title_full | Validation of Reference Genes for Quantitative Real-Time PCR in Bovine PBMCs Transformed and Non-transformed by Theileria annulata |
title_fullStr | Validation of Reference Genes for Quantitative Real-Time PCR in Bovine PBMCs Transformed and Non-transformed by Theileria annulata |
title_full_unstemmed | Validation of Reference Genes for Quantitative Real-Time PCR in Bovine PBMCs Transformed and Non-transformed by Theileria annulata |
title_short | Validation of Reference Genes for Quantitative Real-Time PCR in Bovine PBMCs Transformed and Non-transformed by Theileria annulata |
title_sort | validation of reference genes for quantitative real-time pcr in bovine pbmcs transformed and non-transformed by theileria annulata |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4792322/ https://www.ncbi.nlm.nih.gov/pubmed/26951977 http://dx.doi.org/10.3347/kjp.2016.54.1.39 |
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