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Fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets
In this big data era, it is more urgent than ever to solve two major issues: (i) fast data transmission methods that can facilitate access to data from non-local sources and (ii) fast and efficient data analysis methods that can reveal the key information from the available data for particular purpo...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society Publishing
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4792406/ https://www.ncbi.nlm.nih.gov/pubmed/26953173 http://dx.doi.org/10.1098/rsta.2015.0197 |
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author | Wu, Zhaohua Feng, Jiaxin Qiao, Fangli Tan, Zhe-Min |
author_facet | Wu, Zhaohua Feng, Jiaxin Qiao, Fangli Tan, Zhe-Min |
author_sort | Wu, Zhaohua |
collection | PubMed |
description | In this big data era, it is more urgent than ever to solve two major issues: (i) fast data transmission methods that can facilitate access to data from non-local sources and (ii) fast and efficient data analysis methods that can reveal the key information from the available data for particular purposes. Although approaches in different fields to address these two questions may differ significantly, the common part must involve data compression techniques and a fast algorithm. This paper introduces the recently developed adaptive and spatio-temporally local analysis method, namely the fast multidimensional ensemble empirical mode decomposition (MEEMD), for the analysis of a large spatio-temporal dataset. The original MEEMD uses ensemble empirical mode decomposition to decompose time series at each spatial grid and then pieces together the temporal–spatial evolution of climate variability and change on naturally separated timescales, which is computationally expensive. By taking advantage of the high efficiency of the expression using principal component analysis/empirical orthogonal function analysis for spatio-temporally coherent data, we design a lossy compression method for climate data to facilitate its non-local transmission. We also explain the basic principles behind the fast MEEMD through decomposing principal components instead of original grid-wise time series to speed up computation of MEEMD. Using a typical climate dataset as an example, we demonstrate that our newly designed methods can (i) compress data with a compression rate of one to two orders; and (ii) speed-up the MEEMD algorithm by one to two orders. |
format | Online Article Text |
id | pubmed-4792406 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | The Royal Society Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-47924062016-04-13 Fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets Wu, Zhaohua Feng, Jiaxin Qiao, Fangli Tan, Zhe-Min Philos Trans A Math Phys Eng Sci Articles In this big data era, it is more urgent than ever to solve two major issues: (i) fast data transmission methods that can facilitate access to data from non-local sources and (ii) fast and efficient data analysis methods that can reveal the key information from the available data for particular purposes. Although approaches in different fields to address these two questions may differ significantly, the common part must involve data compression techniques and a fast algorithm. This paper introduces the recently developed adaptive and spatio-temporally local analysis method, namely the fast multidimensional ensemble empirical mode decomposition (MEEMD), for the analysis of a large spatio-temporal dataset. The original MEEMD uses ensemble empirical mode decomposition to decompose time series at each spatial grid and then pieces together the temporal–spatial evolution of climate variability and change on naturally separated timescales, which is computationally expensive. By taking advantage of the high efficiency of the expression using principal component analysis/empirical orthogonal function analysis for spatio-temporally coherent data, we design a lossy compression method for climate data to facilitate its non-local transmission. We also explain the basic principles behind the fast MEEMD through decomposing principal components instead of original grid-wise time series to speed up computation of MEEMD. Using a typical climate dataset as an example, we demonstrate that our newly designed methods can (i) compress data with a compression rate of one to two orders; and (ii) speed-up the MEEMD algorithm by one to two orders. The Royal Society Publishing 2016-04-13 /pmc/articles/PMC4792406/ /pubmed/26953173 http://dx.doi.org/10.1098/rsta.2015.0197 Text en © 2016 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Articles Wu, Zhaohua Feng, Jiaxin Qiao, Fangli Tan, Zhe-Min Fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets |
title | Fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets |
title_full | Fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets |
title_fullStr | Fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets |
title_full_unstemmed | Fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets |
title_short | Fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets |
title_sort | fast multidimensional ensemble empirical mode decomposition for the analysis of big spatio-temporal datasets |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4792406/ https://www.ncbi.nlm.nih.gov/pubmed/26953173 http://dx.doi.org/10.1098/rsta.2015.0197 |
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