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Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation

At autopsy, the time that has elapsed since the time of death is routinely documented and noted as the postmortem interval (PMI). The PMI of human tissue samples is a parameter often reported in research studies and comparable PMI is preferred when comparing different populations, i.e., disease vers...

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Autores principales: Blair, Jeffrey A., Wang, Chunyu, Hernandez, Damarys, Siedlak, Sandra L., Rodgers, Mark S., Achar, Rojan K., Fahmy, Lara M., Torres, Sandy L., Petersen, Robert B., Zhu, Xiongwei, Casadesus, Gemma, Lee, Hyoung-gon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4794172/
https://www.ncbi.nlm.nih.gov/pubmed/26982086
http://dx.doi.org/10.1371/journal.pone.0151615
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author Blair, Jeffrey A.
Wang, Chunyu
Hernandez, Damarys
Siedlak, Sandra L.
Rodgers, Mark S.
Achar, Rojan K.
Fahmy, Lara M.
Torres, Sandy L.
Petersen, Robert B.
Zhu, Xiongwei
Casadesus, Gemma
Lee, Hyoung-gon
author_facet Blair, Jeffrey A.
Wang, Chunyu
Hernandez, Damarys
Siedlak, Sandra L.
Rodgers, Mark S.
Achar, Rojan K.
Fahmy, Lara M.
Torres, Sandy L.
Petersen, Robert B.
Zhu, Xiongwei
Casadesus, Gemma
Lee, Hyoung-gon
author_sort Blair, Jeffrey A.
collection PubMed
description At autopsy, the time that has elapsed since the time of death is routinely documented and noted as the postmortem interval (PMI). The PMI of human tissue samples is a parameter often reported in research studies and comparable PMI is preferred when comparing different populations, i.e., disease versus control patients. In theory, a short PMI may alleviate non-experimental protein denaturation, enzyme activity, and other chemical changes such as the pH, which could affect protein and nucleic acid integrity. Previous studies have compared PMI en masse by looking at many different individual cases each with one unique PMI, which may be affected by individual variance. To overcome this obstacle, in this study human hippocampal segments from the same individuals were sampled at different time points after autopsy creating a series of PMIs for each case. Frozen and fixed tissue was then examined by Western blot, RT-PCR, and immunohistochemistry to evaluate the effect of extended PMI on proteins, nucleic acids, and tissue morphology. In our results, immunostaining profiles for most proteins remained unchanged even after PMI of over 50 h, yet by Western blot distinctive degradation patterns were observed in different protein species. Finally, RNA integrity was lower after extended PMI; however, RNA preservation was variable among cases suggesting antemortem factors may play a larger role than PMI in protein and nucleic acid integrity.
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spelling pubmed-47941722016-03-23 Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation Blair, Jeffrey A. Wang, Chunyu Hernandez, Damarys Siedlak, Sandra L. Rodgers, Mark S. Achar, Rojan K. Fahmy, Lara M. Torres, Sandy L. Petersen, Robert B. Zhu, Xiongwei Casadesus, Gemma Lee, Hyoung-gon PLoS One Research Article At autopsy, the time that has elapsed since the time of death is routinely documented and noted as the postmortem interval (PMI). The PMI of human tissue samples is a parameter often reported in research studies and comparable PMI is preferred when comparing different populations, i.e., disease versus control patients. In theory, a short PMI may alleviate non-experimental protein denaturation, enzyme activity, and other chemical changes such as the pH, which could affect protein and nucleic acid integrity. Previous studies have compared PMI en masse by looking at many different individual cases each with one unique PMI, which may be affected by individual variance. To overcome this obstacle, in this study human hippocampal segments from the same individuals were sampled at different time points after autopsy creating a series of PMIs for each case. Frozen and fixed tissue was then examined by Western blot, RT-PCR, and immunohistochemistry to evaluate the effect of extended PMI on proteins, nucleic acids, and tissue morphology. In our results, immunostaining profiles for most proteins remained unchanged even after PMI of over 50 h, yet by Western blot distinctive degradation patterns were observed in different protein species. Finally, RNA integrity was lower after extended PMI; however, RNA preservation was variable among cases suggesting antemortem factors may play a larger role than PMI in protein and nucleic acid integrity. Public Library of Science 2016-03-16 /pmc/articles/PMC4794172/ /pubmed/26982086 http://dx.doi.org/10.1371/journal.pone.0151615 Text en © 2016 Blair et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Blair, Jeffrey A.
Wang, Chunyu
Hernandez, Damarys
Siedlak, Sandra L.
Rodgers, Mark S.
Achar, Rojan K.
Fahmy, Lara M.
Torres, Sandy L.
Petersen, Robert B.
Zhu, Xiongwei
Casadesus, Gemma
Lee, Hyoung-gon
Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation
title Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation
title_full Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation
title_fullStr Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation
title_full_unstemmed Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation
title_short Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation
title_sort individual case analysis of postmortem interval time on brain tissue preservation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4794172/
https://www.ncbi.nlm.nih.gov/pubmed/26982086
http://dx.doi.org/10.1371/journal.pone.0151615
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