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MTDH genetic variants in colorectal cancer patients

The colorectal carcinogenesis is a complex process encompassing genetic alterations. The oncoprotein AEG-1, encoded by the MTDH gene, was shown previously to be involved in colorectal cancer (CRC). The aim of this study was to determine the frequency and the spectrum of MTDH variants in tumor tissue...

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Autores principales: Gnosa, Sebastian, Ticha, Ivana, Haapaniemi, Staffan, Sun, Xiao-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4794727/
https://www.ncbi.nlm.nih.gov/pubmed/26983693
http://dx.doi.org/10.1038/srep23163
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author Gnosa, Sebastian
Ticha, Ivana
Haapaniemi, Staffan
Sun, Xiao-Feng
author_facet Gnosa, Sebastian
Ticha, Ivana
Haapaniemi, Staffan
Sun, Xiao-Feng
author_sort Gnosa, Sebastian
collection PubMed
description The colorectal carcinogenesis is a complex process encompassing genetic alterations. The oncoprotein AEG-1, encoded by the MTDH gene, was shown previously to be involved in colorectal cancer (CRC). The aim of this study was to determine the frequency and the spectrum of MTDH variants in tumor tissue, and their relationship to clinicopathological variables in CRC patients. The study included tumors from 356 unselected CRC patients. Mutation analysis of the MTDH gene, including coding region and adjacent intronic sequences, was performed by direct DNA sequencing. The corresponding normal colorectal tissue was analyzed in the carriers of exonic variant to confirm germline or somatic origin. We detected 42 intronic variants, where 25 were novel. Furthermore, we found 8 exonic variants of which four, one missense (c.977C > G-germline) and three frameshift mutations (c.533delA-somatic, c.1340dupA-unknown origin, c.1731delA-unknown origin), were novel. In silico prediction analyses suggested four deleterious variants (c.232G > T, c.533delA, c.1340dupA, and c.1731delA). There were no correlations between the MTDH variants and tumor stage, differentiation or patient survival. We described several novel exonic and intronic variants of the MTDH gene. The detection of likely pathogenic truncating mutations and alterations in functional protein domains indicate their clinical significance, although none of the variants had prognostic potential.
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spelling pubmed-47947272016-03-18 MTDH genetic variants in colorectal cancer patients Gnosa, Sebastian Ticha, Ivana Haapaniemi, Staffan Sun, Xiao-Feng Sci Rep Article The colorectal carcinogenesis is a complex process encompassing genetic alterations. The oncoprotein AEG-1, encoded by the MTDH gene, was shown previously to be involved in colorectal cancer (CRC). The aim of this study was to determine the frequency and the spectrum of MTDH variants in tumor tissue, and their relationship to clinicopathological variables in CRC patients. The study included tumors from 356 unselected CRC patients. Mutation analysis of the MTDH gene, including coding region and adjacent intronic sequences, was performed by direct DNA sequencing. The corresponding normal colorectal tissue was analyzed in the carriers of exonic variant to confirm germline or somatic origin. We detected 42 intronic variants, where 25 were novel. Furthermore, we found 8 exonic variants of which four, one missense (c.977C > G-germline) and three frameshift mutations (c.533delA-somatic, c.1340dupA-unknown origin, c.1731delA-unknown origin), were novel. In silico prediction analyses suggested four deleterious variants (c.232G > T, c.533delA, c.1340dupA, and c.1731delA). There were no correlations between the MTDH variants and tumor stage, differentiation or patient survival. We described several novel exonic and intronic variants of the MTDH gene. The detection of likely pathogenic truncating mutations and alterations in functional protein domains indicate their clinical significance, although none of the variants had prognostic potential. Nature Publishing Group 2016-03-17 /pmc/articles/PMC4794727/ /pubmed/26983693 http://dx.doi.org/10.1038/srep23163 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Gnosa, Sebastian
Ticha, Ivana
Haapaniemi, Staffan
Sun, Xiao-Feng
MTDH genetic variants in colorectal cancer patients
title MTDH genetic variants in colorectal cancer patients
title_full MTDH genetic variants in colorectal cancer patients
title_fullStr MTDH genetic variants in colorectal cancer patients
title_full_unstemmed MTDH genetic variants in colorectal cancer patients
title_short MTDH genetic variants in colorectal cancer patients
title_sort mtdh genetic variants in colorectal cancer patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4794727/
https://www.ncbi.nlm.nih.gov/pubmed/26983693
http://dx.doi.org/10.1038/srep23163
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