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An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma
Different genes are associated with categorical classifications of asthma severity. However, continuous outcomes should be used to catch the heterogeneity of asthma phenotypes and to increase the power in association studies. Accordingly, the aim of this study was to evaluate the association between...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4795623/ https://www.ncbi.nlm.nih.gov/pubmed/26986948 http://dx.doi.org/10.1371/journal.pone.0151292 |
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author | Accordini, Simone Calciano, Lucia Bombieri, Cristina Malerba, Giovanni Belpinati, Francesca Lo Presti, Anna Rita Baldan, Alessandro Ferrari, Marcello Perbellini, Luigi de Marco, Roberto |
author_facet | Accordini, Simone Calciano, Lucia Bombieri, Cristina Malerba, Giovanni Belpinati, Francesca Lo Presti, Anna Rita Baldan, Alessandro Ferrari, Marcello Perbellini, Luigi de Marco, Roberto |
author_sort | Accordini, Simone |
collection | PubMed |
description | Different genes are associated with categorical classifications of asthma severity. However, continuous outcomes should be used to catch the heterogeneity of asthma phenotypes and to increase the power in association studies. Accordingly, the aim of this study was to evaluate the association between single nucleotide polymorphisms (SNPs) in candidate gene regions and continuous measures of asthma severity, in adult patients from the general population. In the Gene Environment Interactions in Respiratory Diseases (GEIRD) study (www.geird.org), 326 subjects (aged 20–64) with ever asthma were identified from the general population in Verona (Italy) between 2007 and 2010. A panel of 236 SNPs tagging 51 candidate gene regions (including one or more genes) was analysed. A symptom and treatment score (STS) and pre-bronchodilator FEV(1)% predicted were used as continuous measures of asthma severity. The association of each SNP with STS and FEV(1)% predicted was tested by fitting quasi-gamma and linear regression models, respectively, with gender, body mass index and smoking habits as potential confounders. The Simes multiple-test procedure was used for controlling the false discovery rate (FDR). SNP rs848 in the IL13 gene region (IL5/RAD50/IL13/IL4) was associated with STS (TG/GG vs TT genotype: uncorrected p-value = 0.00006, FDR-corrected p-value = 0.04), whereas rs20541 in the same gene region, in linkage disequilibrium with rs848 (r(2) = 0.94) in our sample, did not reach the statistical significance after adjusting for multiple testing (TC/CC vs TT: uncorrected p-value = 0.0003, FDR-corrected p-value = 0.09). Polymorphisms in other gene regions showed a non-significant moderate association with STS (IL12B, TNS1) or lung function (SERPINE2, GATA3, IL5, NPNT, FAM13A) only. After adjusting for multiple testing and potential confounders, SNP rs848 in the IL13 gene region is significantly associated with a continuous measure of symptom severity in adult subjects with ever asthma. |
format | Online Article Text |
id | pubmed-4795623 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-47956232016-03-23 An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma Accordini, Simone Calciano, Lucia Bombieri, Cristina Malerba, Giovanni Belpinati, Francesca Lo Presti, Anna Rita Baldan, Alessandro Ferrari, Marcello Perbellini, Luigi de Marco, Roberto PLoS One Research Article Different genes are associated with categorical classifications of asthma severity. However, continuous outcomes should be used to catch the heterogeneity of asthma phenotypes and to increase the power in association studies. Accordingly, the aim of this study was to evaluate the association between single nucleotide polymorphisms (SNPs) in candidate gene regions and continuous measures of asthma severity, in adult patients from the general population. In the Gene Environment Interactions in Respiratory Diseases (GEIRD) study (www.geird.org), 326 subjects (aged 20–64) with ever asthma were identified from the general population in Verona (Italy) between 2007 and 2010. A panel of 236 SNPs tagging 51 candidate gene regions (including one or more genes) was analysed. A symptom and treatment score (STS) and pre-bronchodilator FEV(1)% predicted were used as continuous measures of asthma severity. The association of each SNP with STS and FEV(1)% predicted was tested by fitting quasi-gamma and linear regression models, respectively, with gender, body mass index and smoking habits as potential confounders. The Simes multiple-test procedure was used for controlling the false discovery rate (FDR). SNP rs848 in the IL13 gene region (IL5/RAD50/IL13/IL4) was associated with STS (TG/GG vs TT genotype: uncorrected p-value = 0.00006, FDR-corrected p-value = 0.04), whereas rs20541 in the same gene region, in linkage disequilibrium with rs848 (r(2) = 0.94) in our sample, did not reach the statistical significance after adjusting for multiple testing (TC/CC vs TT: uncorrected p-value = 0.0003, FDR-corrected p-value = 0.09). Polymorphisms in other gene regions showed a non-significant moderate association with STS (IL12B, TNS1) or lung function (SERPINE2, GATA3, IL5, NPNT, FAM13A) only. After adjusting for multiple testing and potential confounders, SNP rs848 in the IL13 gene region is significantly associated with a continuous measure of symptom severity in adult subjects with ever asthma. Public Library of Science 2016-03-17 /pmc/articles/PMC4795623/ /pubmed/26986948 http://dx.doi.org/10.1371/journal.pone.0151292 Text en © 2016 Accordini et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Accordini, Simone Calciano, Lucia Bombieri, Cristina Malerba, Giovanni Belpinati, Francesca Lo Presti, Anna Rita Baldan, Alessandro Ferrari, Marcello Perbellini, Luigi de Marco, Roberto An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma |
title | An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma |
title_full | An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma |
title_fullStr | An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma |
title_full_unstemmed | An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma |
title_short | An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma |
title_sort | interleukin 13 polymorphism is associated with symptom severity in adult subjects with ever asthma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4795623/ https://www.ncbi.nlm.nih.gov/pubmed/26986948 http://dx.doi.org/10.1371/journal.pone.0151292 |
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