Cargando…

An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma

Different genes are associated with categorical classifications of asthma severity. However, continuous outcomes should be used to catch the heterogeneity of asthma phenotypes and to increase the power in association studies. Accordingly, the aim of this study was to evaluate the association between...

Descripción completa

Detalles Bibliográficos
Autores principales: Accordini, Simone, Calciano, Lucia, Bombieri, Cristina, Malerba, Giovanni, Belpinati, Francesca, Lo Presti, Anna Rita, Baldan, Alessandro, Ferrari, Marcello, Perbellini, Luigi, de Marco, Roberto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4795623/
https://www.ncbi.nlm.nih.gov/pubmed/26986948
http://dx.doi.org/10.1371/journal.pone.0151292
_version_ 1782421632617283584
author Accordini, Simone
Calciano, Lucia
Bombieri, Cristina
Malerba, Giovanni
Belpinati, Francesca
Lo Presti, Anna Rita
Baldan, Alessandro
Ferrari, Marcello
Perbellini, Luigi
de Marco, Roberto
author_facet Accordini, Simone
Calciano, Lucia
Bombieri, Cristina
Malerba, Giovanni
Belpinati, Francesca
Lo Presti, Anna Rita
Baldan, Alessandro
Ferrari, Marcello
Perbellini, Luigi
de Marco, Roberto
author_sort Accordini, Simone
collection PubMed
description Different genes are associated with categorical classifications of asthma severity. However, continuous outcomes should be used to catch the heterogeneity of asthma phenotypes and to increase the power in association studies. Accordingly, the aim of this study was to evaluate the association between single nucleotide polymorphisms (SNPs) in candidate gene regions and continuous measures of asthma severity, in adult patients from the general population. In the Gene Environment Interactions in Respiratory Diseases (GEIRD) study (www.geird.org), 326 subjects (aged 20–64) with ever asthma were identified from the general population in Verona (Italy) between 2007 and 2010. A panel of 236 SNPs tagging 51 candidate gene regions (including one or more genes) was analysed. A symptom and treatment score (STS) and pre-bronchodilator FEV(1)% predicted were used as continuous measures of asthma severity. The association of each SNP with STS and FEV(1)% predicted was tested by fitting quasi-gamma and linear regression models, respectively, with gender, body mass index and smoking habits as potential confounders. The Simes multiple-test procedure was used for controlling the false discovery rate (FDR). SNP rs848 in the IL13 gene region (IL5/RAD50/IL13/IL4) was associated with STS (TG/GG vs TT genotype: uncorrected p-value = 0.00006, FDR-corrected p-value = 0.04), whereas rs20541 in the same gene region, in linkage disequilibrium with rs848 (r(2) = 0.94) in our sample, did not reach the statistical significance after adjusting for multiple testing (TC/CC vs TT: uncorrected p-value = 0.0003, FDR-corrected p-value = 0.09). Polymorphisms in other gene regions showed a non-significant moderate association with STS (IL12B, TNS1) or lung function (SERPINE2, GATA3, IL5, NPNT, FAM13A) only. After adjusting for multiple testing and potential confounders, SNP rs848 in the IL13 gene region is significantly associated with a continuous measure of symptom severity in adult subjects with ever asthma.
format Online
Article
Text
id pubmed-4795623
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-47956232016-03-23 An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma Accordini, Simone Calciano, Lucia Bombieri, Cristina Malerba, Giovanni Belpinati, Francesca Lo Presti, Anna Rita Baldan, Alessandro Ferrari, Marcello Perbellini, Luigi de Marco, Roberto PLoS One Research Article Different genes are associated with categorical classifications of asthma severity. However, continuous outcomes should be used to catch the heterogeneity of asthma phenotypes and to increase the power in association studies. Accordingly, the aim of this study was to evaluate the association between single nucleotide polymorphisms (SNPs) in candidate gene regions and continuous measures of asthma severity, in adult patients from the general population. In the Gene Environment Interactions in Respiratory Diseases (GEIRD) study (www.geird.org), 326 subjects (aged 20–64) with ever asthma were identified from the general population in Verona (Italy) between 2007 and 2010. A panel of 236 SNPs tagging 51 candidate gene regions (including one or more genes) was analysed. A symptom and treatment score (STS) and pre-bronchodilator FEV(1)% predicted were used as continuous measures of asthma severity. The association of each SNP with STS and FEV(1)% predicted was tested by fitting quasi-gamma and linear regression models, respectively, with gender, body mass index and smoking habits as potential confounders. The Simes multiple-test procedure was used for controlling the false discovery rate (FDR). SNP rs848 in the IL13 gene region (IL5/RAD50/IL13/IL4) was associated with STS (TG/GG vs TT genotype: uncorrected p-value = 0.00006, FDR-corrected p-value = 0.04), whereas rs20541 in the same gene region, in linkage disequilibrium with rs848 (r(2) = 0.94) in our sample, did not reach the statistical significance after adjusting for multiple testing (TC/CC vs TT: uncorrected p-value = 0.0003, FDR-corrected p-value = 0.09). Polymorphisms in other gene regions showed a non-significant moderate association with STS (IL12B, TNS1) or lung function (SERPINE2, GATA3, IL5, NPNT, FAM13A) only. After adjusting for multiple testing and potential confounders, SNP rs848 in the IL13 gene region is significantly associated with a continuous measure of symptom severity in adult subjects with ever asthma. Public Library of Science 2016-03-17 /pmc/articles/PMC4795623/ /pubmed/26986948 http://dx.doi.org/10.1371/journal.pone.0151292 Text en © 2016 Accordini et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Accordini, Simone
Calciano, Lucia
Bombieri, Cristina
Malerba, Giovanni
Belpinati, Francesca
Lo Presti, Anna Rita
Baldan, Alessandro
Ferrari, Marcello
Perbellini, Luigi
de Marco, Roberto
An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma
title An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma
title_full An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma
title_fullStr An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma
title_full_unstemmed An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma
title_short An Interleukin 13 Polymorphism Is Associated with Symptom Severity in Adult Subjects with Ever Asthma
title_sort interleukin 13 polymorphism is associated with symptom severity in adult subjects with ever asthma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4795623/
https://www.ncbi.nlm.nih.gov/pubmed/26986948
http://dx.doi.org/10.1371/journal.pone.0151292
work_keys_str_mv AT accordinisimone aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT calcianolucia aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT bombiericristina aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT malerbagiovanni aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT belpinatifrancesca aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT loprestiannarita aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT baldanalessandro aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT ferrarimarcello aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT perbelliniluigi aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT demarcoroberto aninterleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT accordinisimone interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT calcianolucia interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT bombiericristina interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT malerbagiovanni interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT belpinatifrancesca interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT loprestiannarita interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT baldanalessandro interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT ferrarimarcello interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT perbelliniluigi interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma
AT demarcoroberto interleukin13polymorphismisassociatedwithsymptomseverityinadultsubjectswitheverasthma