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Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1)

PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to facilitate studies on the fine-scale population genetic structure of Ficus tikoua (Moraceae), a prostrate shrub known to have highly restricted gene flow. METHODS AND RESULTS: Microsatellite primers were developed using the b...

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Autores principales: Zhang, Lu-Shui, Tan, Lu, Hu, Dai-Mei, Chen, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4795916/
https://www.ncbi.nlm.nih.gov/pubmed/27011895
http://dx.doi.org/10.3732/apps.1500099
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author Zhang, Lu-Shui
Tan, Lu
Hu, Dai-Mei
Chen, Yan
author_facet Zhang, Lu-Shui
Tan, Lu
Hu, Dai-Mei
Chen, Yan
author_sort Zhang, Lu-Shui
collection PubMed
description PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to facilitate studies on the fine-scale population genetic structure of Ficus tikoua (Moraceae), a prostrate shrub known to have highly restricted gene flow. METHODS AND RESULTS: Microsatellite primers were developed using the biotin-streptavidin capture method and scanned for polymorphism within 76 individuals sampled from three natural F. tikoua populations. Fourteen loci were shown to be polymorphic, with allele numbers ranging from three to 16. The observed and expected heterozygosity in the three populations ranged from 0 to 1 and from 0 to 0.87, respectively. Substantial divergence was found among the populations at some loci. All loci can be successfully amplified in at least eight other Ficus species, indicating good transferability within the genus. CONCLUSIONS: The 14 microsatellite loci will be a helpful tool for assessing the fine-scale genetic structure of F. tikoua.
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spelling pubmed-47959162016-03-23 Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1) Zhang, Lu-Shui Tan, Lu Hu, Dai-Mei Chen, Yan Appl Plant Sci Primer Note PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to facilitate studies on the fine-scale population genetic structure of Ficus tikoua (Moraceae), a prostrate shrub known to have highly restricted gene flow. METHODS AND RESULTS: Microsatellite primers were developed using the biotin-streptavidin capture method and scanned for polymorphism within 76 individuals sampled from three natural F. tikoua populations. Fourteen loci were shown to be polymorphic, with allele numbers ranging from three to 16. The observed and expected heterozygosity in the three populations ranged from 0 to 1 and from 0 to 0.87, respectively. Substantial divergence was found among the populations at some loci. All loci can be successfully amplified in at least eight other Ficus species, indicating good transferability within the genus. CONCLUSIONS: The 14 microsatellite loci will be a helpful tool for assessing the fine-scale genetic structure of F. tikoua. Botanical Society of America 2016-03-03 /pmc/articles/PMC4795916/ /pubmed/27011895 http://dx.doi.org/10.3732/apps.1500099 Text en © 2016 Zhang et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Zhang, Lu-Shui
Tan, Lu
Hu, Dai-Mei
Chen, Yan
Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1)
title Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1)
title_full Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1)
title_fullStr Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1)
title_full_unstemmed Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1)
title_short Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1)
title_sort development of 14 polymorphic microsatellite loci for ficus tikoua (moraceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4795916/
https://www.ncbi.nlm.nih.gov/pubmed/27011895
http://dx.doi.org/10.3732/apps.1500099
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