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Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1)
PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to facilitate studies on the fine-scale population genetic structure of Ficus tikoua (Moraceae), a prostrate shrub known to have highly restricted gene flow. METHODS AND RESULTS: Microsatellite primers were developed using the b...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4795916/ https://www.ncbi.nlm.nih.gov/pubmed/27011895 http://dx.doi.org/10.3732/apps.1500099 |
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author | Zhang, Lu-Shui Tan, Lu Hu, Dai-Mei Chen, Yan |
author_facet | Zhang, Lu-Shui Tan, Lu Hu, Dai-Mei Chen, Yan |
author_sort | Zhang, Lu-Shui |
collection | PubMed |
description | PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to facilitate studies on the fine-scale population genetic structure of Ficus tikoua (Moraceae), a prostrate shrub known to have highly restricted gene flow. METHODS AND RESULTS: Microsatellite primers were developed using the biotin-streptavidin capture method and scanned for polymorphism within 76 individuals sampled from three natural F. tikoua populations. Fourteen loci were shown to be polymorphic, with allele numbers ranging from three to 16. The observed and expected heterozygosity in the three populations ranged from 0 to 1 and from 0 to 0.87, respectively. Substantial divergence was found among the populations at some loci. All loci can be successfully amplified in at least eight other Ficus species, indicating good transferability within the genus. CONCLUSIONS: The 14 microsatellite loci will be a helpful tool for assessing the fine-scale genetic structure of F. tikoua. |
format | Online Article Text |
id | pubmed-4795916 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-47959162016-03-23 Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1) Zhang, Lu-Shui Tan, Lu Hu, Dai-Mei Chen, Yan Appl Plant Sci Primer Note PREMISE OF THE STUDY: Polymorphic microsatellite markers were developed to facilitate studies on the fine-scale population genetic structure of Ficus tikoua (Moraceae), a prostrate shrub known to have highly restricted gene flow. METHODS AND RESULTS: Microsatellite primers were developed using the biotin-streptavidin capture method and scanned for polymorphism within 76 individuals sampled from three natural F. tikoua populations. Fourteen loci were shown to be polymorphic, with allele numbers ranging from three to 16. The observed and expected heterozygosity in the three populations ranged from 0 to 1 and from 0 to 0.87, respectively. Substantial divergence was found among the populations at some loci. All loci can be successfully amplified in at least eight other Ficus species, indicating good transferability within the genus. CONCLUSIONS: The 14 microsatellite loci will be a helpful tool for assessing the fine-scale genetic structure of F. tikoua. Botanical Society of America 2016-03-03 /pmc/articles/PMC4795916/ /pubmed/27011895 http://dx.doi.org/10.3732/apps.1500099 Text en © 2016 Zhang et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Zhang, Lu-Shui Tan, Lu Hu, Dai-Mei Chen, Yan Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1) |
title | Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1) |
title_full | Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1) |
title_fullStr | Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1) |
title_full_unstemmed | Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1) |
title_short | Development of 14 polymorphic microsatellite loci for Ficus tikoua (Moraceae)(1) |
title_sort | development of 14 polymorphic microsatellite loci for ficus tikoua (moraceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4795916/ https://www.ncbi.nlm.nih.gov/pubmed/27011895 http://dx.doi.org/10.3732/apps.1500099 |
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