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The life cycle of a genome project: perspectives and guidelines inspired by insect genome projects

Many research programs on non-model species biology have been empowered by genomics. In turn, genomics is underpinned by a reference sequence and ancillary information created by so-called “genome projects”. The most reliable genome projects are the ones created as part of an active research program...

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Autor principal: Papanicolaou, Alexie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4798206/
https://www.ncbi.nlm.nih.gov/pubmed/27006757
http://dx.doi.org/10.12688/f1000research.7559.1
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author Papanicolaou, Alexie
author_facet Papanicolaou, Alexie
author_sort Papanicolaou, Alexie
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description Many research programs on non-model species biology have been empowered by genomics. In turn, genomics is underpinned by a reference sequence and ancillary information created by so-called “genome projects”. The most reliable genome projects are the ones created as part of an active research program and designed to address specific questions but their life extends past publication. In this opinion paper I outline four key insights that have facilitated maintaining genomic communities: the key role of computational capability, the iterative process of building genomic resources, the value of community participation and the importance of manual curation. Taken together, these ideas can and do ensure the longevity of genome projects and the growing non-model species community can use them to focus a discussion with regards to its future genomic infrastructure.
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spelling pubmed-47982062016-03-21 The life cycle of a genome project: perspectives and guidelines inspired by insect genome projects Papanicolaou, Alexie F1000Res Opinion Article Many research programs on non-model species biology have been empowered by genomics. In turn, genomics is underpinned by a reference sequence and ancillary information created by so-called “genome projects”. The most reliable genome projects are the ones created as part of an active research program and designed to address specific questions but their life extends past publication. In this opinion paper I outline four key insights that have facilitated maintaining genomic communities: the key role of computational capability, the iterative process of building genomic resources, the value of community participation and the importance of manual curation. Taken together, these ideas can and do ensure the longevity of genome projects and the growing non-model species community can use them to focus a discussion with regards to its future genomic infrastructure. F1000Research 2016-01-05 /pmc/articles/PMC4798206/ /pubmed/27006757 http://dx.doi.org/10.12688/f1000research.7559.1 Text en Copyright: © 2016 Papanicolaou A http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Opinion Article
Papanicolaou, Alexie
The life cycle of a genome project: perspectives and guidelines inspired by insect genome projects
title The life cycle of a genome project: perspectives and guidelines inspired by insect genome projects
title_full The life cycle of a genome project: perspectives and guidelines inspired by insect genome projects
title_fullStr The life cycle of a genome project: perspectives and guidelines inspired by insect genome projects
title_full_unstemmed The life cycle of a genome project: perspectives and guidelines inspired by insect genome projects
title_short The life cycle of a genome project: perspectives and guidelines inspired by insect genome projects
title_sort life cycle of a genome project: perspectives and guidelines inspired by insect genome projects
topic Opinion Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4798206/
https://www.ncbi.nlm.nih.gov/pubmed/27006757
http://dx.doi.org/10.12688/f1000research.7559.1
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