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A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans

Random search is a behavioral strategy used by organisms from bacteria to humans to locate food that is randomly distributed and undetectable at a distance. We investigated this behavior in the nematode Caenorhabditis elegans, an organism with a small, well-described nervous system. Here we formulat...

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Autores principales: Roberts, William M, Augustine, Steven B, Lawton, Kristy J, Lindsay, Theodore H, Thiele, Tod R, Izquierdo, Eduardo J, Faumont, Serge, Lindsay, Rebecca A, Britton, Matthew Cale, Pokala, Navin, Bargmann, Cornelia I, Lockery, Shawn R
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4798983/
https://www.ncbi.nlm.nih.gov/pubmed/26824391
http://dx.doi.org/10.7554/eLife.12572
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author Roberts, William M
Augustine, Steven B
Lawton, Kristy J
Lindsay, Theodore H
Thiele, Tod R
Izquierdo, Eduardo J
Faumont, Serge
Lindsay, Rebecca A
Britton, Matthew Cale
Pokala, Navin
Bargmann, Cornelia I
Lockery, Shawn R
author_facet Roberts, William M
Augustine, Steven B
Lawton, Kristy J
Lindsay, Theodore H
Thiele, Tod R
Izquierdo, Eduardo J
Faumont, Serge
Lindsay, Rebecca A
Britton, Matthew Cale
Pokala, Navin
Bargmann, Cornelia I
Lockery, Shawn R
author_sort Roberts, William M
collection PubMed
description Random search is a behavioral strategy used by organisms from bacteria to humans to locate food that is randomly distributed and undetectable at a distance. We investigated this behavior in the nematode Caenorhabditis elegans, an organism with a small, well-described nervous system. Here we formulate a mathematical model of random search abstracted from the C. elegans connectome and fit to a large-scale kinematic analysis of C. elegans behavior at submicron resolution. The model predicts behavioral effects of neuronal ablations and genetic perturbations, as well as unexpected aspects of wild type behavior. The predictive success of the model indicates that random search in C. elegans can be understood in terms of a neuronal flip-flop circuit involving reciprocal inhibition between two populations of stochastic neurons. Our findings establish a unified theoretical framework for understanding C. elegans locomotion and a testable neuronal model of random search that can be applied to other organisms.
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spelling pubmed-47989832016-03-21 A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans Roberts, William M Augustine, Steven B Lawton, Kristy J Lindsay, Theodore H Thiele, Tod R Izquierdo, Eduardo J Faumont, Serge Lindsay, Rebecca A Britton, Matthew Cale Pokala, Navin Bargmann, Cornelia I Lockery, Shawn R eLife Computational and Systems Biology Random search is a behavioral strategy used by organisms from bacteria to humans to locate food that is randomly distributed and undetectable at a distance. We investigated this behavior in the nematode Caenorhabditis elegans, an organism with a small, well-described nervous system. Here we formulate a mathematical model of random search abstracted from the C. elegans connectome and fit to a large-scale kinematic analysis of C. elegans behavior at submicron resolution. The model predicts behavioral effects of neuronal ablations and genetic perturbations, as well as unexpected aspects of wild type behavior. The predictive success of the model indicates that random search in C. elegans can be understood in terms of a neuronal flip-flop circuit involving reciprocal inhibition between two populations of stochastic neurons. Our findings establish a unified theoretical framework for understanding C. elegans locomotion and a testable neuronal model of random search that can be applied to other organisms. eLife Sciences Publications, Ltd 2016-01-29 /pmc/articles/PMC4798983/ /pubmed/26824391 http://dx.doi.org/10.7554/eLife.12572 Text en © 2016, Roberts et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Computational and Systems Biology
Roberts, William M
Augustine, Steven B
Lawton, Kristy J
Lindsay, Theodore H
Thiele, Tod R
Izquierdo, Eduardo J
Faumont, Serge
Lindsay, Rebecca A
Britton, Matthew Cale
Pokala, Navin
Bargmann, Cornelia I
Lockery, Shawn R
A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans
title A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans
title_full A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans
title_fullStr A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans
title_full_unstemmed A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans
title_short A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans
title_sort stochastic neuronal model predicts random search behaviors at multiple spatial scales in c. elegans
topic Computational and Systems Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4798983/
https://www.ncbi.nlm.nih.gov/pubmed/26824391
http://dx.doi.org/10.7554/eLife.12572
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