Cargando…

Effects of number of training generations on genomic prediction for various traits in a layer chicken population

BACKGROUND: Genomic estimated breeding values (GEBV) based on single nucleotide polymorphism (SNP) genotypes are widely used in animal improvement programs. It is typically assumed that the larger the number of animals is in the training set, the higher is the prediction accuracy of GEBV. The aim of...

Descripción completa

Detalles Bibliográficos
Autores principales:	Weng, Ziqing, Wolc, Anna, Shen, Xia, Fernando, Rohan L., Dekkers, Jack C. M., Arango, Jesus, Settar, Petek, Fulton, Janet E., O’Sullivan, Neil P., Garrick, Dorian J.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2016
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4799631/ https://www.ncbi.nlm.nih.gov/pubmed/26992471 http://dx.doi.org/10.1186/s12711-016-0198-9

Ejemplares similares

Identification of recombination hotspots and quantitative trait loci for recombination rate in layer chickens
por: Weng, Ziqing, et al.
Publicado: (2019)

Persistence of accuracy of genomic estimated breeding values over generations in layer chickens
por: Wolc, Anna, et al.
Publicado: (2011)

Breeding value prediction for production traits in layer chickens using pedigree or genomic relationships in a reduced animal model
por: Wolc, Anna, et al.
Publicado: (2011)

Response and inbreeding from a genomic selection experiment in layer chickens
por: Wolc, Anna, et al.
Publicado: (2015)

Mixture models detect large effect QTL better than GBLUP and result in more accurate and persistent predictions
por: Wolc, Anna, et al.
Publicado: (2016)

Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations
por: Abasht, Behnam, et al.
Publicado: (2009)

Heritability of perching behavior and its genetic relationship with incidence of floor eggs in Rhode Island Red chickens
por: Wolc, Anna, et al.
Publicado: (2021)

The impact of endogenous Avian Leukosis Viruses (ALVE) on production traits in elite layer lines
por: Fulton, Janet E., et al.
Publicado: (2021)

Genomic prediction of avian influenza infection outcome in layer chickens
por: Wolc, Anna, et al.
Publicado: (2018)

Detection of copy number variations in brown and white layers based on genotyping panels with different densities
por: Drobik-Czwarno, Wioleta, et al.
Publicado: (2018)

Accuracy of genomic prediction of shell quality in a White Leghorn line
por: Wolc, A., et al.
Publicado: (2020)

Genetic Variation within the Mx Gene of Commercially Selected Chicken Lines Reveals Multiple Haplotypes, Recombination and a Protein under Selection Pressure
por: Fulton, Janet E., et al.
Publicado: (2014)

A class of Bayesian methods to combine large numbers of genotyped and non-genotyped animals for whole-genome analyses
por: Fernando, Rohan L, et al.
Publicado: (2014)

Genomic breeding value prediction and QTL mapping of QTLMAS2011 data using Bayesian and GBLUP methods
por: Zeng, Jian, et al.
Publicado: (2012)

Mapping QTL affecting resistance to Marek's disease in an F6 advanced intercross population of commercial layer chickens
por: Heifetz, Eliyahu M, et al.
Publicado: (2009)

A nested mixture model for genomic prediction using whole-genome SNP genotypes
por: Zeng, Jian, et al.
Publicado: (2018)

Comparison of alternative approaches to single-trait genomic prediction using genotyped and non-genotyped Hanwoo beef cattle
por: Lee, Joonho, et al.
Publicado: (2017)

Research Note: Comparison of chicken blood chemistry and electrolyte parameters between the portable i-STAT1 clinical analyzer and VetScan VS2 serum biochemistry panel using Hy-Line commercial white-egg laying hens
por: Sauer, Z.C., et al.
Publicado: (2020)

Genome-wide association study of insect bite hypersensitivity in two horse populations in the Netherlands
por: Schurink, Anouk, et al.
Publicado: (2012)

Genetics and Genomic Regions Affecting Response to Newcastle Disease Virus Infection under Heat Stress in Layer Chickens
por: Saelao, Perot, et al.
Publicado: (2019)

A biphasic curve for modeling, classifying, and predicting egg production in single cycle and molted flocks
por: Wolc, Anna, et al.
Publicado: (2020)

Genomic breeding value prediction and QTL mapping of QTLMAS2010 data using Bayesian Methods
por: Sun, Xiaochen, et al.
Publicado: (2011)

Genomic selection of purebred animals for crossbred performance in the presence of dominant gene action
por: Zeng, Jian, et al.
Publicado: (2013)

A Fast EM Algorithm for BayesA-Like Prediction of Genomic Breeding Values
por: Sun, Xiaochen, et al.
Publicado: (2012)

Whole Genome Association Studies of Residual Feed Intake and Related Traits in the Pig
por: Onteru, Suneel K., et al.
Publicado: (2013)

Empirical Comparisons of Different Statistical Models To Identify and Validate Kernel Row Number-Associated Variants from Structured Multi-parent Mapping Populations of Maize
por: Yang, Jinliang, et al.
Publicado: (2018)

Application of Bayesian genomic prediction methods to genome-wide association analyses
por: Wolc, Anna, et al.
Publicado: (2022)

Computational strategies for alternative single-step Bayesian regression models with large numbers of genotyped and non-genotyped animals
por: Fernando, Rohan L., et al.
Publicado: (2016)

Mapping of QTL affecting incidence of blood and meat inclusions in egg layers
por: Honkatukia, Mervi, et al.
Publicado: (2011)

Accuracy of prediction of simulated polygenic phenotypes and their underlying quantitative trait loci genotypes using real or imputed whole-genome markers in cattle
por: Hassani, Saeed, et al.
Publicado: (2015)

Commercial Hy-Line W-36 pullet and laying hen venous blood gas and chemistry profiles utilizing the portable i-STAT®1 analyzer
por: Schaal, T. P., et al.
Publicado: (2015)

Purebred-crossbred genetic parameters for reproductive traits in swine
por: Kramer, Luke M, et al.
Publicado: (2021)

Associations of myostatin gene polymorphisms with performance and mortality traits in broiler chickens
por: Ye, Xianghai, et al.
Publicado: (2007)

Unraveling genomic associations with feed efficiency and body weight traits in chickens through an integrative approach
por: Moreira, Gabriel Costa Monteiro, et al.
Publicado: (2019)

A Missense Mutation in the MYBPH Gene Is Associated With Abdominal Fat Traits in Meat-Type Chickens
por: Trevisoli, Priscila Anchieta, et al.
Publicado: (2021)

Genome-wide association scan for QTL and their positional candidate genes associated with internal organ traits in chickens
por: Moreira, Gabriel Costa Monteiro, et al.
Publicado: (2019)

XSim: Simulation of Descendants from Ancestors with Sequence Data
por: Cheng, Hao, et al.
Publicado: (2015)

A method to obtain exact single-step GBLUP for non-genotyped descendants when the genomic relationship matrix of ancestors is not available
por: Garrick, Dorian J., et al.
Publicado: (2022)

HandyCNV: Standardized Summary, Annotation, Comparison, and Visualization of Copy Number Variant, Copy Number Variation Region, and Runs of Homozygosity
por: Zhou, Jinghang, et al.
Publicado: (2021)

Inheritance of fertility in broiler chickens
por: Wolc, Anna, et al.
Publicado: (2009)

Cannot write session to /tmp/vufind_sessions/sess_1vmr8kcu4uffl8ndptfisprts9