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Genome-Wide Identification and Expression Analysis of the 14-3-3 Family Genes in Medicago truncatula
The 14-3-3 gene family, which is conserved in eukaryotes, is involved in protein-protein interactions and mediates signal transduction. However, detailed investigations of the 14-3-3 gene family in Medicago truncatula are largely unknown. In this study, the identification and study of M. truncatula...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4801894/ https://www.ncbi.nlm.nih.gov/pubmed/27047505 http://dx.doi.org/10.3389/fpls.2016.00320 |
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author | Qin, Cheng Cheng, Linming Shen, Jingqin Zhang, Yunhong Cao, Huimin Lu, Dan Shen, Chenjia |
author_facet | Qin, Cheng Cheng, Linming Shen, Jingqin Zhang, Yunhong Cao, Huimin Lu, Dan Shen, Chenjia |
author_sort | Qin, Cheng |
collection | PubMed |
description | The 14-3-3 gene family, which is conserved in eukaryotes, is involved in protein-protein interactions and mediates signal transduction. However, detailed investigations of the 14-3-3 gene family in Medicago truncatula are largely unknown. In this study, the identification and study of M. truncatula 14-3-3-family genes were performed based on the latest M. truncatula genome. In the M. truncatula genome, 10 14-3-3 family genes were identified, and they can be grouped into ε and non-ε groups. An exon-intron analysis showed that the gene structures are conserved in the same group. The protein structure analysis showed that 14-3-3 proteins in M. truncatula are composed of nine typical antiparallel α-helices. The expression patterns of Mt14-3-3 genes indicated that they are expressed in all tissues. Furthermore, the gene expression levels of Mt14-3-3 under hormone treatment and Sinorhizobium meliloti infection showed that the Mt14-3-3 genes were involve in nodule formation. Our findings lay a solid foundation for further functional studies of 14-3-3 in M. truncatula. |
format | Online Article Text |
id | pubmed-4801894 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-48018942016-04-04 Genome-Wide Identification and Expression Analysis of the 14-3-3 Family Genes in Medicago truncatula Qin, Cheng Cheng, Linming Shen, Jingqin Zhang, Yunhong Cao, Huimin Lu, Dan Shen, Chenjia Front Plant Sci Plant Science The 14-3-3 gene family, which is conserved in eukaryotes, is involved in protein-protein interactions and mediates signal transduction. However, detailed investigations of the 14-3-3 gene family in Medicago truncatula are largely unknown. In this study, the identification and study of M. truncatula 14-3-3-family genes were performed based on the latest M. truncatula genome. In the M. truncatula genome, 10 14-3-3 family genes were identified, and they can be grouped into ε and non-ε groups. An exon-intron analysis showed that the gene structures are conserved in the same group. The protein structure analysis showed that 14-3-3 proteins in M. truncatula are composed of nine typical antiparallel α-helices. The expression patterns of Mt14-3-3 genes indicated that they are expressed in all tissues. Furthermore, the gene expression levels of Mt14-3-3 under hormone treatment and Sinorhizobium meliloti infection showed that the Mt14-3-3 genes were involve in nodule formation. Our findings lay a solid foundation for further functional studies of 14-3-3 in M. truncatula. Frontiers Media S.A. 2016-03-22 /pmc/articles/PMC4801894/ /pubmed/27047505 http://dx.doi.org/10.3389/fpls.2016.00320 Text en Copyright © 2016 Qin, Cheng, Shen, Zhang, Cao, Lu and Shen. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Qin, Cheng Cheng, Linming Shen, Jingqin Zhang, Yunhong Cao, Huimin Lu, Dan Shen, Chenjia Genome-Wide Identification and Expression Analysis of the 14-3-3 Family Genes in Medicago truncatula |
title | Genome-Wide Identification and Expression Analysis of the 14-3-3 Family Genes in Medicago truncatula |
title_full | Genome-Wide Identification and Expression Analysis of the 14-3-3 Family Genes in Medicago truncatula |
title_fullStr | Genome-Wide Identification and Expression Analysis of the 14-3-3 Family Genes in Medicago truncatula |
title_full_unstemmed | Genome-Wide Identification and Expression Analysis of the 14-3-3 Family Genes in Medicago truncatula |
title_short | Genome-Wide Identification and Expression Analysis of the 14-3-3 Family Genes in Medicago truncatula |
title_sort | genome-wide identification and expression analysis of the 14-3-3 family genes in medicago truncatula |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4801894/ https://www.ncbi.nlm.nih.gov/pubmed/27047505 http://dx.doi.org/10.3389/fpls.2016.00320 |
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