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Cost and accuracy of advanced breeding trial designs in apple

Trialing advanced candidates in tree fruit crops is expensive due to the long-term nature of the planting and labor-intensive evaluations required to make selection decisions. How closely the trait evaluations approximate the true trait value needs balancing with the cost of the program. Designs of...

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Autores principales: Harshman, Julia M, Evans, Kate M, Hardner, Craig M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4804396/
https://www.ncbi.nlm.nih.gov/pubmed/27019717
http://dx.doi.org/10.1038/hortres.2016.8
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author Harshman, Julia M
Evans, Kate M
Hardner, Craig M
author_facet Harshman, Julia M
Evans, Kate M
Hardner, Craig M
author_sort Harshman, Julia M
collection PubMed
description Trialing advanced candidates in tree fruit crops is expensive due to the long-term nature of the planting and labor-intensive evaluations required to make selection decisions. How closely the trait evaluations approximate the true trait value needs balancing with the cost of the program. Designs of field trials of advanced apple candidates in which reduced number of locations, the number of years and the number of harvests per year were modeled to investigate the effect on the cost and accuracy in an operational breeding program. The aim was to find designs that would allow evaluation of the most additional candidates while sacrificing the least accuracy. Critical percentage difference, response to selection, and correlated response were used to examine changes in accuracy of trait evaluations. For the quality traits evaluated, accuracy and response to selection were not substantially reduced for most trial designs. Risk management influences the decision to change trial design, and some designs had greater risk associated with them. Balancing cost and accuracy with risk yields valuable insight into advanced breeding trial design. The methods outlined in this analysis would be well suited to other horticultural crop breeding programs.
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spelling pubmed-48043962016-03-25 Cost and accuracy of advanced breeding trial designs in apple Harshman, Julia M Evans, Kate M Hardner, Craig M Hortic Res Article Trialing advanced candidates in tree fruit crops is expensive due to the long-term nature of the planting and labor-intensive evaluations required to make selection decisions. How closely the trait evaluations approximate the true trait value needs balancing with the cost of the program. Designs of field trials of advanced apple candidates in which reduced number of locations, the number of years and the number of harvests per year were modeled to investigate the effect on the cost and accuracy in an operational breeding program. The aim was to find designs that would allow evaluation of the most additional candidates while sacrificing the least accuracy. Critical percentage difference, response to selection, and correlated response were used to examine changes in accuracy of trait evaluations. For the quality traits evaluated, accuracy and response to selection were not substantially reduced for most trial designs. Risk management influences the decision to change trial design, and some designs had greater risk associated with them. Balancing cost and accuracy with risk yields valuable insight into advanced breeding trial design. The methods outlined in this analysis would be well suited to other horticultural crop breeding programs. Nature Publishing Group 2016-03-23 /pmc/articles/PMC4804396/ /pubmed/27019717 http://dx.doi.org/10.1038/hortres.2016.8 Text en Copyright © 2016 Nanjing Agricultural University http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Harshman, Julia M
Evans, Kate M
Hardner, Craig M
Cost and accuracy of advanced breeding trial designs in apple
title Cost and accuracy of advanced breeding trial designs in apple
title_full Cost and accuracy of advanced breeding trial designs in apple
title_fullStr Cost and accuracy of advanced breeding trial designs in apple
title_full_unstemmed Cost and accuracy of advanced breeding trial designs in apple
title_short Cost and accuracy of advanced breeding trial designs in apple
title_sort cost and accuracy of advanced breeding trial designs in apple
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4804396/
https://www.ncbi.nlm.nih.gov/pubmed/27019717
http://dx.doi.org/10.1038/hortres.2016.8
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