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Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation
The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility in scientific research by conducting replications of selected experiments from a number of high-profile papers in the field of cancer biology. The papers, which were published between 2010 and 2012, w...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4805546/ https://www.ncbi.nlm.nih.gov/pubmed/26971564 http://dx.doi.org/10.7554/eLife.10860 |
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author | Richarson, Adam D Scott, David A Zagnitko, Olga Aza-Blanc, Pedro Chang, Chih-Cheng Russler-Germain, David A |
author_facet | Richarson, Adam D Scott, David A Zagnitko, Olga Aza-Blanc, Pedro Chang, Chih-Cheng Russler-Germain, David A |
author_sort | Richarson, Adam D |
collection | PubMed |
description | The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility in scientific research by conducting replications of selected experiments from a number of high-profile papers in the field of cancer biology. The papers, which were published between 2010 and 2012, were selected on the basis of citations and Altmetric scores (Errington et al., 2014). This Registered Report describes the proposed replication plan of key experiments from “IDH mutation impairs histone demethylation and results in a block to cell differentiation” by Lu and colleagues, published in Nature in 2012 (Lu et al., 2012). The experiments that will be replicated are those reported in Figures 1B, 2A, 2B, 2D and 4D. Lu and colleagues demonstrated that expression of mutant forms of IDH1 or IDH2 caused global increases in histone methylation and increased levels of 2 hydroxyglutarate (Figure 1B). This was correlated with a block in differentiation (Figures 2A, B and D). This effect appeared to be mediated by the histone demethylase KDM4C (Figure 4D). The Reproducibility Project: Cancer Biology is a collaboration between the Center for Open Scienceand Science Exchange, and the results of the replications will be published by eLife. DOI: http://dx.doi.org/10.7554/eLife.10860.001 |
format | Online Article Text |
id | pubmed-4805546 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-48055462016-03-25 Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation Richarson, Adam D Scott, David A Zagnitko, Olga Aza-Blanc, Pedro Chang, Chih-Cheng Russler-Germain, David A eLife Human Biology and Medicine The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility in scientific research by conducting replications of selected experiments from a number of high-profile papers in the field of cancer biology. The papers, which were published between 2010 and 2012, were selected on the basis of citations and Altmetric scores (Errington et al., 2014). This Registered Report describes the proposed replication plan of key experiments from “IDH mutation impairs histone demethylation and results in a block to cell differentiation” by Lu and colleagues, published in Nature in 2012 (Lu et al., 2012). The experiments that will be replicated are those reported in Figures 1B, 2A, 2B, 2D and 4D. Lu and colleagues demonstrated that expression of mutant forms of IDH1 or IDH2 caused global increases in histone methylation and increased levels of 2 hydroxyglutarate (Figure 1B). This was correlated with a block in differentiation (Figures 2A, B and D). This effect appeared to be mediated by the histone demethylase KDM4C (Figure 4D). The Reproducibility Project: Cancer Biology is a collaboration between the Center for Open Scienceand Science Exchange, and the results of the replications will be published by eLife. DOI: http://dx.doi.org/10.7554/eLife.10860.001 eLife Sciences Publications, Ltd 2016-03-14 /pmc/articles/PMC4805546/ /pubmed/26971564 http://dx.doi.org/10.7554/eLife.10860 Text en © 2016, Richarson et al http://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Human Biology and Medicine Richarson, Adam D Scott, David A Zagnitko, Olga Aza-Blanc, Pedro Chang, Chih-Cheng Russler-Germain, David A Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation |
title | Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation |
title_full | Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation |
title_fullStr | Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation |
title_full_unstemmed | Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation |
title_short | Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation |
title_sort | registered report: idh mutation impairs histone demethylation and results in a block to cell differentiation |
topic | Human Biology and Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4805546/ https://www.ncbi.nlm.nih.gov/pubmed/26971564 http://dx.doi.org/10.7554/eLife.10860 |
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