Cargando…

Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation

The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility in scientific research by conducting replications of selected experiments from a number of high-profile papers in the field of cancer biology. The papers, which were published between 2010 and 2012, w...

Descripción completa

Detalles Bibliográficos
Autores principales: Richarson, Adam D, Scott, David A, Zagnitko, Olga, Aza-Blanc, Pedro, Chang, Chih-Cheng, Russler-Germain, David A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4805546/
https://www.ncbi.nlm.nih.gov/pubmed/26971564
http://dx.doi.org/10.7554/eLife.10860
_version_ 1782423155176898560
author Richarson, Adam D
Scott, David A
Zagnitko, Olga
Aza-Blanc, Pedro
Chang, Chih-Cheng
Russler-Germain, David A
author_facet Richarson, Adam D
Scott, David A
Zagnitko, Olga
Aza-Blanc, Pedro
Chang, Chih-Cheng
Russler-Germain, David A
author_sort Richarson, Adam D
collection PubMed
description The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility in scientific research by conducting replications of selected experiments from a number of high-profile papers in the field of cancer biology. The papers, which were published between 2010 and 2012, were selected on the basis of citations and Altmetric scores (Errington et al., 2014). This Registered Report describes the proposed replication plan of key experiments from “IDH mutation impairs histone demethylation and results in a block to cell differentiation” by Lu and colleagues, published in Nature in 2012 (Lu et al., 2012). The experiments that will be replicated are those reported in Figures 1B, 2A, 2B, 2D and 4D. Lu and colleagues demonstrated that expression of mutant forms of IDH1 or IDH2 caused global increases in histone methylation and increased levels of 2 hydroxyglutarate (Figure 1B). This was correlated with a block in differentiation (Figures 2A, B and D). This effect appeared to be mediated by the histone demethylase KDM4C (Figure 4D). The Reproducibility Project: Cancer Biology is a collaboration between the Center for Open Scienceand Science Exchange, and the results of the replications will be published by eLife. DOI: http://dx.doi.org/10.7554/eLife.10860.001
format Online
Article
Text
id pubmed-4805546
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher eLife Sciences Publications, Ltd
record_format MEDLINE/PubMed
spelling pubmed-48055462016-03-25 Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation Richarson, Adam D Scott, David A Zagnitko, Olga Aza-Blanc, Pedro Chang, Chih-Cheng Russler-Germain, David A eLife Human Biology and Medicine The Reproducibility Project: Cancer Biology seeks to address growing concerns about reproducibility in scientific research by conducting replications of selected experiments from a number of high-profile papers in the field of cancer biology. The papers, which were published between 2010 and 2012, were selected on the basis of citations and Altmetric scores (Errington et al., 2014). This Registered Report describes the proposed replication plan of key experiments from “IDH mutation impairs histone demethylation and results in a block to cell differentiation” by Lu and colleagues, published in Nature in 2012 (Lu et al., 2012). The experiments that will be replicated are those reported in Figures 1B, 2A, 2B, 2D and 4D. Lu and colleagues demonstrated that expression of mutant forms of IDH1 or IDH2 caused global increases in histone methylation and increased levels of 2 hydroxyglutarate (Figure 1B). This was correlated with a block in differentiation (Figures 2A, B and D). This effect appeared to be mediated by the histone demethylase KDM4C (Figure 4D). The Reproducibility Project: Cancer Biology is a collaboration between the Center for Open Scienceand Science Exchange, and the results of the replications will be published by eLife. DOI: http://dx.doi.org/10.7554/eLife.10860.001 eLife Sciences Publications, Ltd 2016-03-14 /pmc/articles/PMC4805546/ /pubmed/26971564 http://dx.doi.org/10.7554/eLife.10860 Text en © 2016, Richarson et al http://creativecommons.org/licenses/by/4.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Human Biology and Medicine
Richarson, Adam D
Scott, David A
Zagnitko, Olga
Aza-Blanc, Pedro
Chang, Chih-Cheng
Russler-Germain, David A
Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation
title Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation
title_full Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation
title_fullStr Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation
title_full_unstemmed Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation
title_short Registered report: IDH mutation impairs histone demethylation and results in a block to cell differentiation
title_sort registered report: idh mutation impairs histone demethylation and results in a block to cell differentiation
topic Human Biology and Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4805546/
https://www.ncbi.nlm.nih.gov/pubmed/26971564
http://dx.doi.org/10.7554/eLife.10860
work_keys_str_mv AT richarsonadamd registeredreportidhmutationimpairshistonedemethylationandresultsinablocktocelldifferentiation
AT scottdavida registeredreportidhmutationimpairshistonedemethylationandresultsinablocktocelldifferentiation
AT zagnitkoolga registeredreportidhmutationimpairshistonedemethylationandresultsinablocktocelldifferentiation
AT azablancpedro registeredreportidhmutationimpairshistonedemethylationandresultsinablocktocelldifferentiation
AT changchihcheng registeredreportidhmutationimpairshistonedemethylationandresultsinablocktocelldifferentiation
AT russlergermaindavida registeredreportidhmutationimpairshistonedemethylationandresultsinablocktocelldifferentiation
AT registeredreportidhmutationimpairshistonedemethylationandresultsinablocktocelldifferentiation