Cargando…

An Efficient Approach to Screening Epigenome-Wide Data

Screening cytosine-phosphate-guanine dinucleotide (CpG) DNA methylation sites in association with some covariate(s) is desired due to high dimensionality. We incorporate surrogate variable analyses (SVAs) into (ordinary or robust) linear regressions and utilize training and testing samples for neste...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ray, Meredith A., Tong, Xin, Lockett, Gabrielle A., Zhang, Hongmei, Karmaus, Wilfried J. J.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Hindawi Publishing Corporation 2016
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4808532/ https://www.ncbi.nlm.nih.gov/pubmed/27034928 http://dx.doi.org/10.1155/2016/2615348

Ejemplares similares

Screening genome-wide DNA methylation CpG sites via training and testing data utilizing surrogate variables
por: Ray, Meredith, et al.
Publicado: (2014)

Epigenome-wide association study of asthma and wheeze characterizes loci within HK1
por: Everson, Todd M., et al.
Publicado: (2019)

DNA Methylation and Asthma Acquisition during Adolescence and Post-Adolescence, an Epigenome-Wide Longitudinal Study
por: Rathod, Aniruddha, et al.
Publicado: (2022)

Epigenome-Wide Association of Infant Feeding and Changes in DNA Methylation from Birth to 10 Years
por: Mallisetty, Yamini, et al.
Publicado: (2020)

Identifying CpG sites associated with eczema via random forest screening of epigenome-scale DNA methylation
por: Quraishi, B. M., et al.
Publicado: (2015)

Epigenome-Wide Association Study Reveals Duration of Breastfeeding Is Associated with Epigenetic Differences in Children
por: Sherwood, William B., et al.
Publicado: (2020)

The interplay of DNA methylation over time with Th2 pathway genetic variants on asthma risk and temporal asthma transition
por: Zhang, Hongmei, et al.
Publicado: (2014)

Age at onset of different pubertal signs in boys and girls and differential DNA methylation at age 10 and 18 years: an epigenome-wide follow-up study
por: Chen, Su, et al.
Publicado: (2020)

Changes in DNA Methylation from Age 18 to Pregnancy in Type 1, 2, and 17 T Helper and Regulatory T-Cells Pathway Genes
por: Iqbal, Sabrina, et al.
Publicado: (2018)

DNA methylation loci associated with atopy and high serum IgE: a genome-wide application of recursive Random Forest feature selection
por: Everson, Todd M., et al.
Publicado: (2015)

Comparison of different cell type correction methods for genome-scale epigenetics studies
por: Kaushal, Akhilesh, et al.
Publicado: (2017)

Oral contraceptives modify the effect of GATA3 polymorphisms on the risk of asthma at the age of 18 years via DNA methylation
por: Guthikonda, Kranthi, et al.
Publicado: (2014)

Which methods to choose to correct cell types in genome-scale blood-derived DNA methylation data?
por: Kaushal, Akhilesh, et al.
Publicado: (2015)

Epigenome-wide association study of lung function level and its change
por: Imboden, Medea, et al.
Publicado: (2019)

Epigenomics of Pancreatic Cancer: A Critical Role for Epigenome-Wide Studies
por: Singh, Rahul R., et al.
Publicado: (2019)

Can we apply the Mendelian randomization methodology without considering epigenetic effects?
por: Ogbuanu, Ikechukwu U, et al.
Publicado: (2009)

Infant feeding pattern in the first six months of age in USA: a follow-up study
por: Karmaus, Wilfried, et al.
Publicado: (2017)

Duration of breastfeeding is associated with leptin (LEP) DNA methylation profiles and BMI in 10-year-old children
por: Sherwood, William B., et al.
Publicado: (2019)

iSeg: an efficient algorithm for segmentation of genomic and epigenomic data
por: Girimurugan, Senthil B., et al.
Publicado: (2018)

A longitudinal epigenome-wide association study of preeclamptic and normotensive pregnancy
por: Liu, Shuwei, et al.
Publicado: (2023)

Methods for Dealing With Missing Covariate Data in Epigenome-Wide Association Studies
por: Mills, Harriet L, et al.
Publicado: (2019)

Genome-wide epigenomic profiling for biomarker discovery
por: Dirks, René A. M., et al.
Publicado: (2016)

Estimands in epigenome-wide association studies
por: Kruppa, Jochen, et al.
Publicado: (2021)

An epigenome-wide view of osteoarthritis in primary tissues
por: Kreitmaier, Peter, et al.
Publicado: (2022)

EWASdb: epigenome-wide association study database
por: liu, Di, et al.
Publicado: (2019)

New approaches to manipulating the epigenome
por: Day, Jeremy J.
Publicado: (2014)

Making Sense of the Epigenome Using Data Integration Approaches
por: Cazaly, Emma, et al.
Publicado: (2019)

Epigenome-wide contributions to individual differences in childhood phenotypes: a GREML approach
por: Neumann, Alexander, et al.
Publicado: (2022)

Blood-based epigenome-wide analyses of cognitive abilities
por: McCartney, Daniel L., et al.
Publicado: (2022)

Imputation of missing covariate values in epigenome-wide analysis of DNA methylation data
por: Wu, Chong, et al.
Publicado: (2016)

EWAS Open Platform: integrated data, knowledge and toolkit for epigenome-wide association study
por: Xiong, Zhuang, et al.
Publicado: (2021)

The association of infant feeding patterns with food allergy symptoms and food allergy in early childhood
por: Mathias, Joacy G., et al.
Publicado: (2019)

Genome-wide DNA methylation at birth in relation to in utero arsenic exposure and the associated health in later life
por: Kaushal, Akhilesh, et al.
Publicado: (2017)

Epigenome-wide analysis of aging effects on liver regeneration
por: Wang, Junying, et al.
Publicado: (2023)

Epigenome-Wide Association Studies (EWAS) in Cancer
por: Verma, Mukesh
Publicado: (2012)

Epigenome-wide association data implicates DNA methylation-mediated genetic risk in psoriasis
por: Zhou, Fusheng, et al.
Publicado: (2016)

Epigenome-wide association studies: current knowledge, strategies and recommendations
por: Campagna, Maria Pia, et al.
Publicado: (2021)

Epigenome-wide association study of seizures in childhood and adolescence
por: Caramaschi, Doretta, et al.
Publicado: (2020)

Epigenome-wide DNA methylation in obsessive-compulsive disorder
por: Schiele, Miriam A., et al.
Publicado: (2022)

Sex differences in the intergenerational link between maternal and neonatal whole blood DNA methylation: a genome-wide analysis in 2 birth cohorts
por: Hu, Jie, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_lh5n9cavo4cfq6lus4kne7d80q