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A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes

BACKGROUND: Standardized schemas, databases, and public data repositories are needed for the studies of malaria vectors that encompass a remarkably diverse array of designs and rapidly generate large data volumes, often in resource-limited tropical settings lacking specialized software or informatic...

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Autores principales: Kiware, Samson S., Russell, Tanya L., Mtema, Zacharia J., Malishee, Alpha D., Chaki, Prosper, Lwetoijera, Dickson, Chanda, Javan, Chinula, Dingani, Majambere, Silas, Gimnig, John E., Smith, Thomas A., Killeen, Gerry F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4809029/
https://www.ncbi.nlm.nih.gov/pubmed/27022408
http://dx.doi.org/10.1186/s13029-016-0050-1
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author Kiware, Samson S.
Russell, Tanya L.
Mtema, Zacharia J.
Malishee, Alpha D.
Chaki, Prosper
Lwetoijera, Dickson
Chanda, Javan
Chinula, Dingani
Majambere, Silas
Gimnig, John E.
Smith, Thomas A.
Killeen, Gerry F.
author_facet Kiware, Samson S.
Russell, Tanya L.
Mtema, Zacharia J.
Malishee, Alpha D.
Chaki, Prosper
Lwetoijera, Dickson
Chanda, Javan
Chinula, Dingani
Majambere, Silas
Gimnig, John E.
Smith, Thomas A.
Killeen, Gerry F.
author_sort Kiware, Samson S.
collection PubMed
description BACKGROUND: Standardized schemas, databases, and public data repositories are needed for the studies of malaria vectors that encompass a remarkably diverse array of designs and rapidly generate large data volumes, often in resource-limited tropical settings lacking specialized software or informatics support. RESULTS: Data from the majority of mosquito studies conformed to a generic schema, with data collection forms recording the experimental design, sorting of collections, details of sample pooling or subdivision, and additional observations. Generically applicable forms with standardized attribute definitions enabled rigorous, consistent data and sample management with generic software and minimal expertise. Forms use now includes 20 experiments, 8 projects, and 15 users at 3 research and control institutes in 3 African countries, resulting in 11 peer-reviewed publications. CONCLUSION: We have designed generic data schema that can be used to develop paper or electronic based data collection forms depending on the availability of resources. We have developed paper-based data collection forms that can be used to collect data from majority of entomological studies across multiple study areas using standardized data formats. Data recorded on these forms with standardized formats can be entered and linked with any relational database software. These informatics tools are recommended because they ensure that medical entomologists save time, improve data quality, and data collected and shared across multiple studies is in standardized formats hence increasing research outputs. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13029-016-0050-1) contains supplementary material, which is available to authorized users.
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spelling pubmed-48090292016-03-29 A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes Kiware, Samson S. Russell, Tanya L. Mtema, Zacharia J. Malishee, Alpha D. Chaki, Prosper Lwetoijera, Dickson Chanda, Javan Chinula, Dingani Majambere, Silas Gimnig, John E. Smith, Thomas A. Killeen, Gerry F. Source Code Biol Med Research BACKGROUND: Standardized schemas, databases, and public data repositories are needed for the studies of malaria vectors that encompass a remarkably diverse array of designs and rapidly generate large data volumes, often in resource-limited tropical settings lacking specialized software or informatics support. RESULTS: Data from the majority of mosquito studies conformed to a generic schema, with data collection forms recording the experimental design, sorting of collections, details of sample pooling or subdivision, and additional observations. Generically applicable forms with standardized attribute definitions enabled rigorous, consistent data and sample management with generic software and minimal expertise. Forms use now includes 20 experiments, 8 projects, and 15 users at 3 research and control institutes in 3 African countries, resulting in 11 peer-reviewed publications. CONCLUSION: We have designed generic data schema that can be used to develop paper or electronic based data collection forms depending on the availability of resources. We have developed paper-based data collection forms that can be used to collect data from majority of entomological studies across multiple study areas using standardized data formats. Data recorded on these forms with standardized formats can be entered and linked with any relational database software. These informatics tools are recommended because they ensure that medical entomologists save time, improve data quality, and data collected and shared across multiple studies is in standardized formats hence increasing research outputs. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13029-016-0050-1) contains supplementary material, which is available to authorized users. BioMed Central 2016-03-28 /pmc/articles/PMC4809029/ /pubmed/27022408 http://dx.doi.org/10.1186/s13029-016-0050-1 Text en © Kiware et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Kiware, Samson S.
Russell, Tanya L.
Mtema, Zacharia J.
Malishee, Alpha D.
Chaki, Prosper
Lwetoijera, Dickson
Chanda, Javan
Chinula, Dingani
Majambere, Silas
Gimnig, John E.
Smith, Thomas A.
Killeen, Gerry F.
A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes
title A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes
title_full A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes
title_fullStr A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes
title_full_unstemmed A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes
title_short A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes
title_sort generic schema and data collection forms applicable to diverse entomological studies of mosquitoes
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4809029/
https://www.ncbi.nlm.nih.gov/pubmed/27022408
http://dx.doi.org/10.1186/s13029-016-0050-1
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