Cargando…
Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam
Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challe...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Microbiology
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4809950/ https://www.ncbi.nlm.nih.gov/pubmed/26865681 http://dx.doi.org/10.1128/JCM.03321-15 |
_version_ | 1782423696889085952 |
---|---|
author | Duong, Vu Thuy Phat, Voong Vinh Tuyen, Ha Thanh Dung, Tran Thi Ngoc Trung, Pham Duc Minh, Pham Van Tu, Le Thi Phuong Campbell, James I. Le Phuc, Hoang Ha, Ton Thi Thanh Ngoc, Nguyen Minh Huong, Nguyen Thi Thanh Tam, Pham Thi Thanh Huong, Dang Thao Xang, Nguyen Van Dong, Nguyen Phuong, Le Thi Hung, Nguyen Van Phu, Bui Duc Phuc, Tran My Thwaites, Guy E. Vi, Lu Lan Rabaa, Maia A. Thompson, Corinne N. Baker, Stephen |
author_facet | Duong, Vu Thuy Phat, Voong Vinh Tuyen, Ha Thanh Dung, Tran Thi Ngoc Trung, Pham Duc Minh, Pham Van Tu, Le Thi Phuong Campbell, James I. Le Phuc, Hoang Ha, Ton Thi Thanh Ngoc, Nguyen Minh Huong, Nguyen Thi Thanh Tam, Pham Thi Thanh Huong, Dang Thao Xang, Nguyen Van Dong, Nguyen Phuong, Le Thi Hung, Nguyen Van Phu, Bui Duc Phuc, Tran My Thwaites, Guy E. Vi, Lu Lan Rabaa, Maia A. Thompson, Corinne N. Baker, Stephen |
author_sort | Duong, Vu Thuy |
collection | PubMed |
description | Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challenge in industrializing countries. Multiplex molecular diagnostic techniques may represent a significant improvement over classical approaches. We evaluated the Luminex xTAG gastrointestinal pathogen panel (GPP) assay for the detection of common enteric bacterial and viral pathogens in Vietnam. Microbiological culture and real-time PCR were used as gold standards. The tests were performed on 479 stool samples collected from people admitted to the hospital for diarrheal disease throughout Vietnam. Sensitivity and specificity were calculated for the xTAG GPP for the seven principal diarrheal etiologies. The sensitivity and specificity for the xTAG GPP were >88% for Shigella spp., Campylobacter spp., rotavirus, norovirus genotype 1/2 (GI/GII), and adenovirus compared to those of microbiological culture and/or real-time PCR. However, the specificity was low (∼60%) for Salmonella species. Additionally, a number of important pathogens that are not identified in routine hospital procedures in this setting, such as Cryptosporidium spp. and Clostridium difficile, were detected with the GPP. The use of the Luminex xTAG GPP for the detection of enteric pathogens in settings, like Vietnam, would dramatically improve the diagnostic accuracy and capacity of hospital laboratories, allowing for timely and appropriate therapy decisions and a wider understanding of the epidemiology of pathogens associated with severe diarrheal disease in low-resource settings. |
format | Online Article Text |
id | pubmed-4809950 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-48099502016-04-04 Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam Duong, Vu Thuy Phat, Voong Vinh Tuyen, Ha Thanh Dung, Tran Thi Ngoc Trung, Pham Duc Minh, Pham Van Tu, Le Thi Phuong Campbell, James I. Le Phuc, Hoang Ha, Ton Thi Thanh Ngoc, Nguyen Minh Huong, Nguyen Thi Thanh Tam, Pham Thi Thanh Huong, Dang Thao Xang, Nguyen Van Dong, Nguyen Phuong, Le Thi Hung, Nguyen Van Phu, Bui Duc Phuc, Tran My Thwaites, Guy E. Vi, Lu Lan Rabaa, Maia A. Thompson, Corinne N. Baker, Stephen J Clin Microbiol Bacteriology Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challenge in industrializing countries. Multiplex molecular diagnostic techniques may represent a significant improvement over classical approaches. We evaluated the Luminex xTAG gastrointestinal pathogen panel (GPP) assay for the detection of common enteric bacterial and viral pathogens in Vietnam. Microbiological culture and real-time PCR were used as gold standards. The tests were performed on 479 stool samples collected from people admitted to the hospital for diarrheal disease throughout Vietnam. Sensitivity and specificity were calculated for the xTAG GPP for the seven principal diarrheal etiologies. The sensitivity and specificity for the xTAG GPP were >88% for Shigella spp., Campylobacter spp., rotavirus, norovirus genotype 1/2 (GI/GII), and adenovirus compared to those of microbiological culture and/or real-time PCR. However, the specificity was low (∼60%) for Salmonella species. Additionally, a number of important pathogens that are not identified in routine hospital procedures in this setting, such as Cryptosporidium spp. and Clostridium difficile, were detected with the GPP. The use of the Luminex xTAG GPP for the detection of enteric pathogens in settings, like Vietnam, would dramatically improve the diagnostic accuracy and capacity of hospital laboratories, allowing for timely and appropriate therapy decisions and a wider understanding of the epidemiology of pathogens associated with severe diarrheal disease in low-resource settings. American Society for Microbiology 2016-03-25 2016-04 /pmc/articles/PMC4809950/ /pubmed/26865681 http://dx.doi.org/10.1128/JCM.03321-15 Text en Copyright © 2016 Duong et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Bacteriology Duong, Vu Thuy Phat, Voong Vinh Tuyen, Ha Thanh Dung, Tran Thi Ngoc Trung, Pham Duc Minh, Pham Van Tu, Le Thi Phuong Campbell, James I. Le Phuc, Hoang Ha, Ton Thi Thanh Ngoc, Nguyen Minh Huong, Nguyen Thi Thanh Tam, Pham Thi Thanh Huong, Dang Thao Xang, Nguyen Van Dong, Nguyen Phuong, Le Thi Hung, Nguyen Van Phu, Bui Duc Phuc, Tran My Thwaites, Guy E. Vi, Lu Lan Rabaa, Maia A. Thompson, Corinne N. Baker, Stephen Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam |
title | Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam |
title_full | Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam |
title_fullStr | Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam |
title_full_unstemmed | Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam |
title_short | Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam |
title_sort | evaluation of luminex xtag gastrointestinal pathogen panel assay for detection of multiple diarrheal pathogens in fecal samples in vietnam |
topic | Bacteriology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4809950/ https://www.ncbi.nlm.nih.gov/pubmed/26865681 http://dx.doi.org/10.1128/JCM.03321-15 |
work_keys_str_mv | AT duongvuthuy evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT phatvoongvinh evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT tuyenhathanh evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT dungtranthingoc evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT trungphamduc evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT minhphamvan evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT tulethiphuong evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT campbelljamesi evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT lephuchoang evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT hatonthithanh evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT ngocnguyenminh evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT huongnguyenthithanh evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT tamphamthithanh evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT huongdangthao evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT xangnguyenvan evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT dongnguyen evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT phuonglethi evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT hungnguyenvan evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT phubuiduc evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT phuctranmy evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT thwaitesguye evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT vilulan evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT rabaamaiaa evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT thompsoncorinnen evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam AT bakerstephen evaluationofluminexxtaggastrointestinalpathogenpanelassayfordetectionofmultiplediarrhealpathogensinfecalsamplesinvietnam |