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Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam

Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challe...

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Autores principales: Duong, Vu Thuy, Phat, Voong Vinh, Tuyen, Ha Thanh, Dung, Tran Thi Ngoc, Trung, Pham Duc, Minh, Pham Van, Tu, Le Thi Phuong, Campbell, James I., Le Phuc, Hoang, Ha, Ton Thi Thanh, Ngoc, Nguyen Minh, Huong, Nguyen Thi Thanh, Tam, Pham Thi Thanh, Huong, Dang Thao, Xang, Nguyen Van, Dong, Nguyen, Phuong, Le Thi, Hung, Nguyen Van, Phu, Bui Duc, Phuc, Tran My, Thwaites, Guy E., Vi, Lu Lan, Rabaa, Maia A., Thompson, Corinne N., Baker, Stephen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4809950/
https://www.ncbi.nlm.nih.gov/pubmed/26865681
http://dx.doi.org/10.1128/JCM.03321-15
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author Duong, Vu Thuy
Phat, Voong Vinh
Tuyen, Ha Thanh
Dung, Tran Thi Ngoc
Trung, Pham Duc
Minh, Pham Van
Tu, Le Thi Phuong
Campbell, James I.
Le Phuc, Hoang
Ha, Ton Thi Thanh
Ngoc, Nguyen Minh
Huong, Nguyen Thi Thanh
Tam, Pham Thi Thanh
Huong, Dang Thao
Xang, Nguyen Van
Dong, Nguyen
Phuong, Le Thi
Hung, Nguyen Van
Phu, Bui Duc
Phuc, Tran My
Thwaites, Guy E.
Vi, Lu Lan
Rabaa, Maia A.
Thompson, Corinne N.
Baker, Stephen
author_facet Duong, Vu Thuy
Phat, Voong Vinh
Tuyen, Ha Thanh
Dung, Tran Thi Ngoc
Trung, Pham Duc
Minh, Pham Van
Tu, Le Thi Phuong
Campbell, James I.
Le Phuc, Hoang
Ha, Ton Thi Thanh
Ngoc, Nguyen Minh
Huong, Nguyen Thi Thanh
Tam, Pham Thi Thanh
Huong, Dang Thao
Xang, Nguyen Van
Dong, Nguyen
Phuong, Le Thi
Hung, Nguyen Van
Phu, Bui Duc
Phuc, Tran My
Thwaites, Guy E.
Vi, Lu Lan
Rabaa, Maia A.
Thompson, Corinne N.
Baker, Stephen
author_sort Duong, Vu Thuy
collection PubMed
description Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challenge in industrializing countries. Multiplex molecular diagnostic techniques may represent a significant improvement over classical approaches. We evaluated the Luminex xTAG gastrointestinal pathogen panel (GPP) assay for the detection of common enteric bacterial and viral pathogens in Vietnam. Microbiological culture and real-time PCR were used as gold standards. The tests were performed on 479 stool samples collected from people admitted to the hospital for diarrheal disease throughout Vietnam. Sensitivity and specificity were calculated for the xTAG GPP for the seven principal diarrheal etiologies. The sensitivity and specificity for the xTAG GPP were >88% for Shigella spp., Campylobacter spp., rotavirus, norovirus genotype 1/2 (GI/GII), and adenovirus compared to those of microbiological culture and/or real-time PCR. However, the specificity was low (∼60%) for Salmonella species. Additionally, a number of important pathogens that are not identified in routine hospital procedures in this setting, such as Cryptosporidium spp. and Clostridium difficile, were detected with the GPP. The use of the Luminex xTAG GPP for the detection of enteric pathogens in settings, like Vietnam, would dramatically improve the diagnostic accuracy and capacity of hospital laboratories, allowing for timely and appropriate therapy decisions and a wider understanding of the epidemiology of pathogens associated with severe diarrheal disease in low-resource settings.
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spelling pubmed-48099502016-04-04 Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam Duong, Vu Thuy Phat, Voong Vinh Tuyen, Ha Thanh Dung, Tran Thi Ngoc Trung, Pham Duc Minh, Pham Van Tu, Le Thi Phuong Campbell, James I. Le Phuc, Hoang Ha, Ton Thi Thanh Ngoc, Nguyen Minh Huong, Nguyen Thi Thanh Tam, Pham Thi Thanh Huong, Dang Thao Xang, Nguyen Van Dong, Nguyen Phuong, Le Thi Hung, Nguyen Van Phu, Bui Duc Phuc, Tran My Thwaites, Guy E. Vi, Lu Lan Rabaa, Maia A. Thompson, Corinne N. Baker, Stephen J Clin Microbiol Bacteriology Diarrheal disease is a complex syndrome that remains a leading cause of global childhood morbidity and mortality. The diagnosis of enteric pathogens in a timely and precise manner is important for making treatment decisions and informing public health policy, but accurate diagnosis is a major challenge in industrializing countries. Multiplex molecular diagnostic techniques may represent a significant improvement over classical approaches. We evaluated the Luminex xTAG gastrointestinal pathogen panel (GPP) assay for the detection of common enteric bacterial and viral pathogens in Vietnam. Microbiological culture and real-time PCR were used as gold standards. The tests were performed on 479 stool samples collected from people admitted to the hospital for diarrheal disease throughout Vietnam. Sensitivity and specificity were calculated for the xTAG GPP for the seven principal diarrheal etiologies. The sensitivity and specificity for the xTAG GPP were >88% for Shigella spp., Campylobacter spp., rotavirus, norovirus genotype 1/2 (GI/GII), and adenovirus compared to those of microbiological culture and/or real-time PCR. However, the specificity was low (∼60%) for Salmonella species. Additionally, a number of important pathogens that are not identified in routine hospital procedures in this setting, such as Cryptosporidium spp. and Clostridium difficile, were detected with the GPP. The use of the Luminex xTAG GPP for the detection of enteric pathogens in settings, like Vietnam, would dramatically improve the diagnostic accuracy and capacity of hospital laboratories, allowing for timely and appropriate therapy decisions and a wider understanding of the epidemiology of pathogens associated with severe diarrheal disease in low-resource settings. American Society for Microbiology 2016-03-25 2016-04 /pmc/articles/PMC4809950/ /pubmed/26865681 http://dx.doi.org/10.1128/JCM.03321-15 Text en Copyright © 2016 Duong et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Bacteriology
Duong, Vu Thuy
Phat, Voong Vinh
Tuyen, Ha Thanh
Dung, Tran Thi Ngoc
Trung, Pham Duc
Minh, Pham Van
Tu, Le Thi Phuong
Campbell, James I.
Le Phuc, Hoang
Ha, Ton Thi Thanh
Ngoc, Nguyen Minh
Huong, Nguyen Thi Thanh
Tam, Pham Thi Thanh
Huong, Dang Thao
Xang, Nguyen Van
Dong, Nguyen
Phuong, Le Thi
Hung, Nguyen Van
Phu, Bui Duc
Phuc, Tran My
Thwaites, Guy E.
Vi, Lu Lan
Rabaa, Maia A.
Thompson, Corinne N.
Baker, Stephen
Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam
title Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam
title_full Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam
title_fullStr Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam
title_full_unstemmed Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam
title_short Evaluation of Luminex xTAG Gastrointestinal Pathogen Panel Assay for Detection of Multiple Diarrheal Pathogens in Fecal Samples in Vietnam
title_sort evaluation of luminex xtag gastrointestinal pathogen panel assay for detection of multiple diarrheal pathogens in fecal samples in vietnam
topic Bacteriology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4809950/
https://www.ncbi.nlm.nih.gov/pubmed/26865681
http://dx.doi.org/10.1128/JCM.03321-15
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