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Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts

In recent years, the marine environment has been the subject of increasing attention from biotechnological and pharmaceutical industries as a valuable and promising source of novel bioactive compounds. Marine biodiscovery programmes have begun to reveal the extent of novel compounds encoded within t...

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Autores principales: Parages, María L., Gutiérrez-Barranquero, José A., Reen, F. Jerry, Dobson, Alan D.W., O’Gara, Fergal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4810074/
https://www.ncbi.nlm.nih.gov/pubmed/27007381
http://dx.doi.org/10.3390/md14030062
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author Parages, María L.
Gutiérrez-Barranquero, José A.
Reen, F. Jerry
Dobson, Alan D.W.
O’Gara, Fergal
author_facet Parages, María L.
Gutiérrez-Barranquero, José A.
Reen, F. Jerry
Dobson, Alan D.W.
O’Gara, Fergal
author_sort Parages, María L.
collection PubMed
description In recent years, the marine environment has been the subject of increasing attention from biotechnological and pharmaceutical industries as a valuable and promising source of novel bioactive compounds. Marine biodiscovery programmes have begun to reveal the extent of novel compounds encoded within the enormous bacterial richness and diversity of the marine ecosystem. A combination of unique physicochemical properties and spatial niche-specific substrates, in wide-ranging and extreme habitats, underscores the potential of the marine environment to deliver on functionally novel biocatalytic activities. With the growing need for green alternatives to industrial processes, and the unique transformations which nature is capable of performing, marine biocatalysts have the potential to markedly improve current industrial pipelines. Furthermore, biocatalysts are known to possess chiral selectivity and specificity, a key focus of pharmaceutical drug design. In this review, we discuss how the explosion in genomics based sequence analysis, allied with parallel developments in synthetic and molecular biology, have the potential to fast-track the discovery and subsequent improvement of a new generation of marine biocatalysts.
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spelling pubmed-48100742016-04-04 Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts Parages, María L. Gutiérrez-Barranquero, José A. Reen, F. Jerry Dobson, Alan D.W. O’Gara, Fergal Mar Drugs Review In recent years, the marine environment has been the subject of increasing attention from biotechnological and pharmaceutical industries as a valuable and promising source of novel bioactive compounds. Marine biodiscovery programmes have begun to reveal the extent of novel compounds encoded within the enormous bacterial richness and diversity of the marine ecosystem. A combination of unique physicochemical properties and spatial niche-specific substrates, in wide-ranging and extreme habitats, underscores the potential of the marine environment to deliver on functionally novel biocatalytic activities. With the growing need for green alternatives to industrial processes, and the unique transformations which nature is capable of performing, marine biocatalysts have the potential to markedly improve current industrial pipelines. Furthermore, biocatalysts are known to possess chiral selectivity and specificity, a key focus of pharmaceutical drug design. In this review, we discuss how the explosion in genomics based sequence analysis, allied with parallel developments in synthetic and molecular biology, have the potential to fast-track the discovery and subsequent improvement of a new generation of marine biocatalysts. MDPI 2016-03-21 /pmc/articles/PMC4810074/ /pubmed/27007381 http://dx.doi.org/10.3390/md14030062 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons by Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Parages, María L.
Gutiérrez-Barranquero, José A.
Reen, F. Jerry
Dobson, Alan D.W.
O’Gara, Fergal
Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts
title Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts
title_full Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts
title_fullStr Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts
title_full_unstemmed Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts
title_short Integrated (Meta) Genomic and Synthetic Biology Approaches to Develop New Biocatalysts
title_sort integrated (meta) genomic and synthetic biology approaches to develop new biocatalysts
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4810074/
https://www.ncbi.nlm.nih.gov/pubmed/27007381
http://dx.doi.org/10.3390/md14030062
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