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A Brazilian Marseillevirus Is the Founding Member of a Lineage in Family Marseilleviridae
In 2003, Acanthamoeba polyphaga mimivirus (APMV) was discovered as parasitizing Acanthamoeba. It was revealed to exhibit remarkable features, especially odd genomic characteristics, and founded viral family Mimiviridae. Subsequently, a second family of giant amoebal viruses was described, Marseillev...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4810266/ https://www.ncbi.nlm.nih.gov/pubmed/26978387 http://dx.doi.org/10.3390/v8030076 |
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author | Dornas, Fábio P. Assis, Felipe L. Aherfi, Sarah Arantes, Thalita Abrahão, Jônatas S. Colson, Philippe La Scola, Bernard |
author_facet | Dornas, Fábio P. Assis, Felipe L. Aherfi, Sarah Arantes, Thalita Abrahão, Jônatas S. Colson, Philippe La Scola, Bernard |
author_sort | Dornas, Fábio P. |
collection | PubMed |
description | In 2003, Acanthamoeba polyphaga mimivirus (APMV) was discovered as parasitizing Acanthamoeba. It was revealed to exhibit remarkable features, especially odd genomic characteristics, and founded viral family Mimiviridae. Subsequently, a second family of giant amoebal viruses was described, Marseilleviridae, whose prototype member is Marseillevirus, discovered in 2009. Currently, the genomes of seven different members of this family have been fully sequenced. Previous phylogenetic analysis suggested the existence of three Marseilleviridae lineages: A, B and C. Here, we describe a new member of this family, Brazilian Marseillevirus (BrMV), which was isolated from a Brazilian sample and whose genome was fully sequenced and analyzed. Surprisingly, data from phylogenetic analyses and comparative genomics, including mean amino acid identity between BrMV and other Marseilleviridae members and the analyses of the core genome and pan-genome of marseilleviruses, indicated that this virus can be assigned to a new Marseilleviridae lineage. Even if the BrMV genome is one of the smallest among Marseilleviridae members, it harbors the second largest gene content into this family. In addition, the BrMV genome encodes 29 ORFans. Here, we describe the isolation and genome analyses of the BrMV strain, and propose its classification as the prototype virus of a new lineage D within the family Marseilleviridae. |
format | Online Article Text |
id | pubmed-4810266 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-48102662016-04-04 A Brazilian Marseillevirus Is the Founding Member of a Lineage in Family Marseilleviridae Dornas, Fábio P. Assis, Felipe L. Aherfi, Sarah Arantes, Thalita Abrahão, Jônatas S. Colson, Philippe La Scola, Bernard Viruses Article In 2003, Acanthamoeba polyphaga mimivirus (APMV) was discovered as parasitizing Acanthamoeba. It was revealed to exhibit remarkable features, especially odd genomic characteristics, and founded viral family Mimiviridae. Subsequently, a second family of giant amoebal viruses was described, Marseilleviridae, whose prototype member is Marseillevirus, discovered in 2009. Currently, the genomes of seven different members of this family have been fully sequenced. Previous phylogenetic analysis suggested the existence of three Marseilleviridae lineages: A, B and C. Here, we describe a new member of this family, Brazilian Marseillevirus (BrMV), which was isolated from a Brazilian sample and whose genome was fully sequenced and analyzed. Surprisingly, data from phylogenetic analyses and comparative genomics, including mean amino acid identity between BrMV and other Marseilleviridae members and the analyses of the core genome and pan-genome of marseilleviruses, indicated that this virus can be assigned to a new Marseilleviridae lineage. Even if the BrMV genome is one of the smallest among Marseilleviridae members, it harbors the second largest gene content into this family. In addition, the BrMV genome encodes 29 ORFans. Here, we describe the isolation and genome analyses of the BrMV strain, and propose its classification as the prototype virus of a new lineage D within the family Marseilleviridae. MDPI 2016-03-10 /pmc/articles/PMC4810266/ /pubmed/26978387 http://dx.doi.org/10.3390/v8030076 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons by Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Dornas, Fábio P. Assis, Felipe L. Aherfi, Sarah Arantes, Thalita Abrahão, Jônatas S. Colson, Philippe La Scola, Bernard A Brazilian Marseillevirus Is the Founding Member of a Lineage in Family Marseilleviridae |
title | A Brazilian Marseillevirus Is the Founding Member of a Lineage in Family Marseilleviridae |
title_full | A Brazilian Marseillevirus Is the Founding Member of a Lineage in Family Marseilleviridae |
title_fullStr | A Brazilian Marseillevirus Is the Founding Member of a Lineage in Family Marseilleviridae |
title_full_unstemmed | A Brazilian Marseillevirus Is the Founding Member of a Lineage in Family Marseilleviridae |
title_short | A Brazilian Marseillevirus Is the Founding Member of a Lineage in Family Marseilleviridae |
title_sort | brazilian marseillevirus is the founding member of a lineage in family marseilleviridae |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4810266/ https://www.ncbi.nlm.nih.gov/pubmed/26978387 http://dx.doi.org/10.3390/v8030076 |
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