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Microbial oil-degradation under mild hydrostatic pressure (10 MPa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria?

Oil spills represent an overwhelming carbon input to the marine environment that immediately impacts the sea surface ecosystem. Microbial communities degrading the oil fraction that eventually sinks to the seafloor must also deal with hydrostatic pressure, which linearly increases with depth. Piezos...

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Autores principales: Scoma, Alberto, Barbato, Marta, Hernandez-Sanabria, Emma, Mapelli, Francesca, Daffonchio, Daniele, Borin, Sara, Boon, Nico
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4810429/
https://www.ncbi.nlm.nih.gov/pubmed/27020120
http://dx.doi.org/10.1038/srep23526
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author Scoma, Alberto
Barbato, Marta
Hernandez-Sanabria, Emma
Mapelli, Francesca
Daffonchio, Daniele
Borin, Sara
Boon, Nico
author_facet Scoma, Alberto
Barbato, Marta
Hernandez-Sanabria, Emma
Mapelli, Francesca
Daffonchio, Daniele
Borin, Sara
Boon, Nico
author_sort Scoma, Alberto
collection PubMed
description Oil spills represent an overwhelming carbon input to the marine environment that immediately impacts the sea surface ecosystem. Microbial communities degrading the oil fraction that eventually sinks to the seafloor must also deal with hydrostatic pressure, which linearly increases with depth. Piezosensitive hydrocarbonoclastic bacteria are ideal candidates to elucidate impaired pathways following oil spills at low depth. In the present paper, we tested two strains of the ubiquitous Alcanivorax genus, namely A. jadensis KS_339 and A. dieselolei KS_293, which is known to rapidly grow after oil spills. Strains were subjected to atmospheric and mild pressure (0.1, 5 and 10 MPa, corresponding to a depth of 0, 500 and 1000 m, respectively) providing n-dodecane as sole carbon source. Pressures equal to 5 and 10 MPa significantly lowered growth yields of both strains. However, in strain KS_293 grown at 10 MPa CO(2) production per cell was not affected, cell integrity was preserved and PO(4)(3−) uptake increased. Analysis of its transcriptome revealed that 95% of its genes were downregulated. Increased transcription involved protein synthesis, energy generation and respiration pathways. Interplay between these factors may play a key role in shaping the structure of microbial communities developed after oil spills at low depth and limit their bioremediation potential.
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spelling pubmed-48104292016-04-04 Microbial oil-degradation under mild hydrostatic pressure (10 MPa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria? Scoma, Alberto Barbato, Marta Hernandez-Sanabria, Emma Mapelli, Francesca Daffonchio, Daniele Borin, Sara Boon, Nico Sci Rep Article Oil spills represent an overwhelming carbon input to the marine environment that immediately impacts the sea surface ecosystem. Microbial communities degrading the oil fraction that eventually sinks to the seafloor must also deal with hydrostatic pressure, which linearly increases with depth. Piezosensitive hydrocarbonoclastic bacteria are ideal candidates to elucidate impaired pathways following oil spills at low depth. In the present paper, we tested two strains of the ubiquitous Alcanivorax genus, namely A. jadensis KS_339 and A. dieselolei KS_293, which is known to rapidly grow after oil spills. Strains were subjected to atmospheric and mild pressure (0.1, 5 and 10 MPa, corresponding to a depth of 0, 500 and 1000 m, respectively) providing n-dodecane as sole carbon source. Pressures equal to 5 and 10 MPa significantly lowered growth yields of both strains. However, in strain KS_293 grown at 10 MPa CO(2) production per cell was not affected, cell integrity was preserved and PO(4)(3−) uptake increased. Analysis of its transcriptome revealed that 95% of its genes were downregulated. Increased transcription involved protein synthesis, energy generation and respiration pathways. Interplay between these factors may play a key role in shaping the structure of microbial communities developed after oil spills at low depth and limit their bioremediation potential. Nature Publishing Group 2016-03-29 /pmc/articles/PMC4810429/ /pubmed/27020120 http://dx.doi.org/10.1038/srep23526 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Scoma, Alberto
Barbato, Marta
Hernandez-Sanabria, Emma
Mapelli, Francesca
Daffonchio, Daniele
Borin, Sara
Boon, Nico
Microbial oil-degradation under mild hydrostatic pressure (10 MPa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria?
title Microbial oil-degradation under mild hydrostatic pressure (10 MPa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria?
title_full Microbial oil-degradation under mild hydrostatic pressure (10 MPa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria?
title_fullStr Microbial oil-degradation under mild hydrostatic pressure (10 MPa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria?
title_full_unstemmed Microbial oil-degradation under mild hydrostatic pressure (10 MPa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria?
title_short Microbial oil-degradation under mild hydrostatic pressure (10 MPa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria?
title_sort microbial oil-degradation under mild hydrostatic pressure (10 mpa): which pathways are impacted in piezosensitive hydrocarbonoclastic bacteria?
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4810429/
https://www.ncbi.nlm.nih.gov/pubmed/27020120
http://dx.doi.org/10.1038/srep23526
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