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Using higher-order Markov models to reveal flow-based communities in networks
Complex systems made of interacting elements are commonly abstracted as networks, in which nodes are associated with dynamic state variables, whose evolution is driven by interactions mediated by the edges. Markov processes have been the prevailing paradigm to model such a network-based dynamics, fo...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4814833/ https://www.ncbi.nlm.nih.gov/pubmed/27029508 http://dx.doi.org/10.1038/srep23194 |
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author | Salnikov, Vsevolod Schaub, Michael T. Lambiotte, Renaud |
author_facet | Salnikov, Vsevolod Schaub, Michael T. Lambiotte, Renaud |
author_sort | Salnikov, Vsevolod |
collection | PubMed |
description | Complex systems made of interacting elements are commonly abstracted as networks, in which nodes are associated with dynamic state variables, whose evolution is driven by interactions mediated by the edges. Markov processes have been the prevailing paradigm to model such a network-based dynamics, for instance in the form of random walks or other types of diffusions. Despite the success of this modelling perspective for numerous applications, it represents an over-simplification of several real-world systems. Importantly, simple Markov models lack memory in their dynamics, an assumption often not realistic in practice. Here, we explore possibilities to enrich the system description by means of second-order Markov models, exploiting empirical pathway information. We focus on the problem of community detection and show that standard network algorithms can be generalized in order to extract novel temporal information about the system under investigation. We also apply our methodology to temporal networks, where we can uncover communities shaped by the temporal correlations in the system. Finally, we discuss relations of the framework of second order Markov processes and the recently proposed formalism of using non-backtracking matrices for community detection. |
format | Online Article Text |
id | pubmed-4814833 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-48148332016-04-04 Using higher-order Markov models to reveal flow-based communities in networks Salnikov, Vsevolod Schaub, Michael T. Lambiotte, Renaud Sci Rep Article Complex systems made of interacting elements are commonly abstracted as networks, in which nodes are associated with dynamic state variables, whose evolution is driven by interactions mediated by the edges. Markov processes have been the prevailing paradigm to model such a network-based dynamics, for instance in the form of random walks or other types of diffusions. Despite the success of this modelling perspective for numerous applications, it represents an over-simplification of several real-world systems. Importantly, simple Markov models lack memory in their dynamics, an assumption often not realistic in practice. Here, we explore possibilities to enrich the system description by means of second-order Markov models, exploiting empirical pathway information. We focus on the problem of community detection and show that standard network algorithms can be generalized in order to extract novel temporal information about the system under investigation. We also apply our methodology to temporal networks, where we can uncover communities shaped by the temporal correlations in the system. Finally, we discuss relations of the framework of second order Markov processes and the recently proposed formalism of using non-backtracking matrices for community detection. Nature Publishing Group 2016-03-31 /pmc/articles/PMC4814833/ /pubmed/27029508 http://dx.doi.org/10.1038/srep23194 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Salnikov, Vsevolod Schaub, Michael T. Lambiotte, Renaud Using higher-order Markov models to reveal flow-based communities in networks |
title | Using higher-order Markov models to reveal flow-based communities in networks |
title_full | Using higher-order Markov models to reveal flow-based communities in networks |
title_fullStr | Using higher-order Markov models to reveal flow-based communities in networks |
title_full_unstemmed | Using higher-order Markov models to reveal flow-based communities in networks |
title_short | Using higher-order Markov models to reveal flow-based communities in networks |
title_sort | using higher-order markov models to reveal flow-based communities in networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4814833/ https://www.ncbi.nlm.nih.gov/pubmed/27029508 http://dx.doi.org/10.1038/srep23194 |
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