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Perspectives on modelling the distribution of ticks for large areas: so far so good?
BACKGROUND: This paper aims to illustrate the steps needed to produce reliable correlative modelling for arthropod vectors, when process-driven models are unavailable. We use ticks as examples because of the (re)emerging interest in the pathogens they transmit. We argue that many scientific publicat...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4815247/ https://www.ncbi.nlm.nih.gov/pubmed/27030357 http://dx.doi.org/10.1186/s13071-016-1474-9 |
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author | Estrada-Peña, Agustín Alexander, Neil Wint, G.R. William |
author_facet | Estrada-Peña, Agustín Alexander, Neil Wint, G.R. William |
author_sort | Estrada-Peña, Agustín |
collection | PubMed |
description | BACKGROUND: This paper aims to illustrate the steps needed to produce reliable correlative modelling for arthropod vectors, when process-driven models are unavailable. We use ticks as examples because of the (re)emerging interest in the pathogens they transmit. We argue that many scientific publications on the topic focus on: (i) the use of explanatory variables that do not adequately describe tick habitats; (ii) the automatic removal of variables causing internal (statistical) problems in the models without considering their ecological significance; and (iii) spatial pattern matching rather than niche mapping, therefore losing information that could be used in projections. METHODS: We focus on extracting information derived from modelling the environmental niche of ticks, as opposed to pattern matching exercises, as a first step in the process of identifying the ecological determinants of tick distributions. We perform models on widely reported species of ticks in Western Palaearctic to derive a set of covariates, describing the climate niche, reconstructing a Fourier transformation of remotely-sensed information. RESULTS: We demonstrate the importance of assembling ecological information that drives the distribution of ticks before undertaking any mapping exercise, from which this kind of information is lost. We also show how customised covariates are more relevant to tick ecology than the widely used set of “Bioclimatic Indicators” (“Biovars”) derived from interpolated datasets, and provide programming scripts to easily calculate them. We demonstrate that standard pre-tailored vegetation categories also fail to describe tick habitats and are best used to describe absence rather than presence of ticks, but could be used in conjunction with the climate based suitability models. CONCLUSIONS: We stress the better performance of climatic covariates obtained from remotely sensed information as opposed to interpolated explanatory variables derived from ground measurements which are flawed with internal issues affecting modelling performance. Extracting ecological conclusions from modelling projections is necessary to gain information about the variables driving the distribution of arthropod vectors. Mapping exercises should be a secondary aim in the study of the distribution of health threatening arthropods. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13071-016-1474-9) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4815247 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-48152472016-04-01 Perspectives on modelling the distribution of ticks for large areas: so far so good? Estrada-Peña, Agustín Alexander, Neil Wint, G.R. William Parasit Vectors Research BACKGROUND: This paper aims to illustrate the steps needed to produce reliable correlative modelling for arthropod vectors, when process-driven models are unavailable. We use ticks as examples because of the (re)emerging interest in the pathogens they transmit. We argue that many scientific publications on the topic focus on: (i) the use of explanatory variables that do not adequately describe tick habitats; (ii) the automatic removal of variables causing internal (statistical) problems in the models without considering their ecological significance; and (iii) spatial pattern matching rather than niche mapping, therefore losing information that could be used in projections. METHODS: We focus on extracting information derived from modelling the environmental niche of ticks, as opposed to pattern matching exercises, as a first step in the process of identifying the ecological determinants of tick distributions. We perform models on widely reported species of ticks in Western Palaearctic to derive a set of covariates, describing the climate niche, reconstructing a Fourier transformation of remotely-sensed information. RESULTS: We demonstrate the importance of assembling ecological information that drives the distribution of ticks before undertaking any mapping exercise, from which this kind of information is lost. We also show how customised covariates are more relevant to tick ecology than the widely used set of “Bioclimatic Indicators” (“Biovars”) derived from interpolated datasets, and provide programming scripts to easily calculate them. We demonstrate that standard pre-tailored vegetation categories also fail to describe tick habitats and are best used to describe absence rather than presence of ticks, but could be used in conjunction with the climate based suitability models. CONCLUSIONS: We stress the better performance of climatic covariates obtained from remotely sensed information as opposed to interpolated explanatory variables derived from ground measurements which are flawed with internal issues affecting modelling performance. Extracting ecological conclusions from modelling projections is necessary to gain information about the variables driving the distribution of arthropod vectors. Mapping exercises should be a secondary aim in the study of the distribution of health threatening arthropods. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13071-016-1474-9) contains supplementary material, which is available to authorized users. BioMed Central 2016-03-31 /pmc/articles/PMC4815247/ /pubmed/27030357 http://dx.doi.org/10.1186/s13071-016-1474-9 Text en © Estrada-Peña et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Estrada-Peña, Agustín Alexander, Neil Wint, G.R. William Perspectives on modelling the distribution of ticks for large areas: so far so good? |
title | Perspectives on modelling the distribution of ticks for large areas: so far so good? |
title_full | Perspectives on modelling the distribution of ticks for large areas: so far so good? |
title_fullStr | Perspectives on modelling the distribution of ticks for large areas: so far so good? |
title_full_unstemmed | Perspectives on modelling the distribution of ticks for large areas: so far so good? |
title_short | Perspectives on modelling the distribution of ticks for large areas: so far so good? |
title_sort | perspectives on modelling the distribution of ticks for large areas: so far so good? |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4815247/ https://www.ncbi.nlm.nih.gov/pubmed/27030357 http://dx.doi.org/10.1186/s13071-016-1474-9 |
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