Pepper: cytoscape app for protein complex expansion using protein–protein interaction networks

We introduce Pepper (Protein complex Expansion using Protein–Protein intERactions), a Cytoscape app designed to identify protein complexes as densely connected subnetworks from seed lists of proteins derived from proteomic studies. Pepper identifies connected subgraph by using multi-objective optimi...

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Detalles Bibliográficos
Autores principales: Winterhalter, C., Nicolle, R., Louis, A., To, C., Radvanyi, F., Elati, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4816032/
https://www.ncbi.nlm.nih.gov/pubmed/25138169
http://dx.doi.org/10.1093/bioinformatics/btu517

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