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Surface Gene Variants of Hepatitis B Virus in Saudi Patients
BACKGROUND/AIMS: Hepatitis B virus (HBV) continues to be one of the most important viral pathogens in humans. Surface (S) protein is the major HBV antigen that mediates virus attachment and entry and determines the virus subtype. Mutations in S gene, particularly in the “a” determinant, can influenc...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Medknow Publications & Media Pvt Ltd
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4817297/ https://www.ncbi.nlm.nih.gov/pubmed/26997220 http://dx.doi.org/10.4103/1319-3767.167186 |
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author | Al-Qudari, Ahmed Y. Amer, Haitham M. Abdo, Ayman A. Hussain, Zahid Al-Hamoudi, Waleed Alswat, Khalid Almajhdi, Fahad N. |
author_facet | Al-Qudari, Ahmed Y. Amer, Haitham M. Abdo, Ayman A. Hussain, Zahid Al-Hamoudi, Waleed Alswat, Khalid Almajhdi, Fahad N. |
author_sort | Al-Qudari, Ahmed Y. |
collection | PubMed |
description | BACKGROUND/AIMS: Hepatitis B virus (HBV) continues to be one of the most important viral pathogens in humans. Surface (S) protein is the major HBV antigen that mediates virus attachment and entry and determines the virus subtype. Mutations in S gene, particularly in the “a” determinant, can influence virus detection by ELISA and may generate escape mutants. Since no records have documented the S gene mutations in HBV strains circulating in Saudi Arabia, the current study was designed to study sequence variation of S gene in strains circulating in Saudi Arabia and its correlation with clinical and risk factors. PATIENTS AND METHODS: A total of 123 HBV-infected patients were recruited for this study. Clinical and biochemical parameters, serological markers, and viral load were determined in all patients. The entire S gene sequence of samples with viral load exceeding 2000 IU/mL was retrieved and exploited in sequence and phylogenetic analysis. PATIENTS AND METHODS: A total of 123 HBV-infected patients were recruited for this study. Clinical and biochemical parameters, serological markers, and viral load were determined in all patients. The entire S gene sequence of samples with viral load exceeding 2000 IU/mL was retrieved and exploited in sequence and phylogenetic analysis. RESULTS: A total of 48 mutations (21 unique) were recorded in viral strains in Saudi Arabia, among which 24 (11 unique) changed their respective amino acids. Two amino acid changes were recorded in “a” determinant, including F130L and S135F with no evidence of the vaccine escape mutant G145R in any of the samples. No specific relationship was recognized between the mutation/amino acid change record of HBsAg in strains in Saudi Arabia and clinical or laboratory data. Phylogenetic analysis categorized HBV viral strains in Saudi Arabia as members of subgenotypes D1 and D3. CONCLUSION: The present report is the first that describes mutation analysis of HBsAg in strains in Saudi Arabia on both nucleotide and amino acid levels. Different substitutions, particularly in major hydrophilic region, may have a potential influence on disease diagnosis, vaccination strategy, and antiviral chemotherapy. |
format | Online Article Text |
id | pubmed-4817297 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Medknow Publications & Media Pvt Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-48172972016-04-22 Surface Gene Variants of Hepatitis B Virus in Saudi Patients Al-Qudari, Ahmed Y. Amer, Haitham M. Abdo, Ayman A. Hussain, Zahid Al-Hamoudi, Waleed Alswat, Khalid Almajhdi, Fahad N. Saudi J Gastroenterol Original Article BACKGROUND/AIMS: Hepatitis B virus (HBV) continues to be one of the most important viral pathogens in humans. Surface (S) protein is the major HBV antigen that mediates virus attachment and entry and determines the virus subtype. Mutations in S gene, particularly in the “a” determinant, can influence virus detection by ELISA and may generate escape mutants. Since no records have documented the S gene mutations in HBV strains circulating in Saudi Arabia, the current study was designed to study sequence variation of S gene in strains circulating in Saudi Arabia and its correlation with clinical and risk factors. PATIENTS AND METHODS: A total of 123 HBV-infected patients were recruited for this study. Clinical and biochemical parameters, serological markers, and viral load were determined in all patients. The entire S gene sequence of samples with viral load exceeding 2000 IU/mL was retrieved and exploited in sequence and phylogenetic analysis. PATIENTS AND METHODS: A total of 123 HBV-infected patients were recruited for this study. Clinical and biochemical parameters, serological markers, and viral load were determined in all patients. The entire S gene sequence of samples with viral load exceeding 2000 IU/mL was retrieved and exploited in sequence and phylogenetic analysis. RESULTS: A total of 48 mutations (21 unique) were recorded in viral strains in Saudi Arabia, among which 24 (11 unique) changed their respective amino acids. Two amino acid changes were recorded in “a” determinant, including F130L and S135F with no evidence of the vaccine escape mutant G145R in any of the samples. No specific relationship was recognized between the mutation/amino acid change record of HBsAg in strains in Saudi Arabia and clinical or laboratory data. Phylogenetic analysis categorized HBV viral strains in Saudi Arabia as members of subgenotypes D1 and D3. CONCLUSION: The present report is the first that describes mutation analysis of HBsAg in strains in Saudi Arabia on both nucleotide and amino acid levels. Different substitutions, particularly in major hydrophilic region, may have a potential influence on disease diagnosis, vaccination strategy, and antiviral chemotherapy. Medknow Publications & Media Pvt Ltd 2016 /pmc/articles/PMC4817297/ /pubmed/26997220 http://dx.doi.org/10.4103/1319-3767.167186 Text en Copyright: © Saudi Journal of Gastroenterology http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution NonCommercial ShareAlike 3.0 License, which allows others to remix, tweak, and build upon the work non commercially, as long as the author is credited and the new creations are licensed under the identical terms. |
spellingShingle | Original Article Al-Qudari, Ahmed Y. Amer, Haitham M. Abdo, Ayman A. Hussain, Zahid Al-Hamoudi, Waleed Alswat, Khalid Almajhdi, Fahad N. Surface Gene Variants of Hepatitis B Virus in Saudi Patients |
title | Surface Gene Variants of Hepatitis B Virus in Saudi Patients |
title_full | Surface Gene Variants of Hepatitis B Virus in Saudi Patients |
title_fullStr | Surface Gene Variants of Hepatitis B Virus in Saudi Patients |
title_full_unstemmed | Surface Gene Variants of Hepatitis B Virus in Saudi Patients |
title_short | Surface Gene Variants of Hepatitis B Virus in Saudi Patients |
title_sort | surface gene variants of hepatitis b virus in saudi patients |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4817297/ https://www.ncbi.nlm.nih.gov/pubmed/26997220 http://dx.doi.org/10.4103/1319-3767.167186 |
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